RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 KIFC3Q9BVG8 833 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 FGFBP2Q9BYJ0 223 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 CCDC113Q9H0I3 377 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 PAK6Q9NQU5 681 aaPredicted RBP11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 TOPORSQ9NS56 1045 aaPredicted RBP11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 ANKFY1Q9P2R3 1169 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 PHF24Q9UPV7 400 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 TRPV2Q9Y5S1 764 aa11.04□□□□□ -0.64
FOXCUT-201ENST00000628509 SIP14410 1827 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 A0A0B4J269 797 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 AKR1B15C9JRZ8 316 aaPredicted RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 PMM2O15305 246 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CCP110O43303 1012 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 XPOTO43592 962 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 AKAP3O75969 853 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 VTNP04004 478 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CCL5P13501 91 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 DARSP14868 501 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 HOXD13P35453 343 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 YARSP54577 528 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 MRPS6P82932 125 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 MBTD1Q05BQ5 628 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 MCL1Q07820 350 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 KCNA1Q09470 495 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 KCNH2Q12809 1159 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CCSAPQ6IQ19 270 aaPredicted RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CACNA2D4Q7Z3S7 1137 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 SERINC5Q86VE9 423 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 NT5DC4Q86YG4 428 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 IRF2BP1Q8IU81 584 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 TXLNBQ8N3L3 684 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 DNAJC5GQ8N7S2 189 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 SPC24Q8NBT2 197 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CAGE1Q8TC20 777 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CACTINQ8WUQ7 758 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 DNAJB3Q8WWF6 145 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 FBXL18Q96ME1 805 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 ACO2Q99798 780 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 TMEM106CQ9BVX2 250 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CCDC94Q9BW85 323 aaPredicted RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CELF4Q9BZC1 486 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 IMPG2Q9BZV3 1241 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 DNAI2Q9GZS0 605 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 RPF1Q9H9Y2 349 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 CHST12Q9NRB3 414 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 TSKSQ9UJT2 592 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 LUC7L2Q9Y383 392 aaKnown RBP11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 ADGRA3Q8IWK6 1321 aa11.03□□□□□ -0.64
FOXCUT-201ENST00000628509 A0A1W2PQJ5 194 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 MYADML2A6NDP7 307 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 ARVCFO00192 962 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 TREHO43280 583 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 TFRCP02786 760 aaKnown RBP11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 CLTAP09496 248 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 ZSCAN20P17040 1043 aaPredicted RBP11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 MSNP26038 577 aaKnown RBP11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 DRP2Q13474 957 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 EXOC3L4Q17RC7 722 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 KRT39Q6A163 491 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 SLC27A1Q6PCB7 646 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 KSR1Q8IVT5 923 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 SH3TC2Q8TF17 1288 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 NAP1L5Q96NT1 182 aaPredicted RBP11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 PCIF1Q9H4Z3 704 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 MMRN2Q9H8L6 949 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 IFT122Q9HBG6 1241 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 RBAKQ9NYW8 714 aaPredicted RBP11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 OGDHLQ9ULD0 1010 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 GINS2Q9Y248 185 aa11.02□□□□□ -0.65
FOXCUT-201ENST00000628509 A0A1W2PQ45 241 aaPredicted RBP11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 A0A1W2PQY0 241 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 DCDC2CA8MYV0 355 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 ZC3H11AO75152 810 aaKnown RBP eCLIP11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 IPO7O95373 1038 aaKnown RBP11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 TNNC2P02585 160 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 GJB1P08034 283 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 HSPA8P11142 646 aaKnown RBP11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 TNNI1P19237 187 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 FMO5P49326 533 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 MXI1P50539 228 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 RAB27AP51159 221 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 MYL7Q01449 175 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 CYP24A1Q07973 514 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 PSMD6Q15008 389 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 KIZQ2M2Z5 673 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 ENOSF1Q7L5Y1 443 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 RDH13Q8NBN7 331 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 RSPH1Q8WYR4 309 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 ARMC5Q96C12 935 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 ANKRD36BP1Q96IX9 119 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 MFSD14AQ96MC6 490 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 DEFB118Q96PH6 123 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 PANX2Q96RD6 677 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 UNC93B1Q9H1C4 597 aa11.01□□□□□ -0.65
FOXCUT-201ENST00000628509 ADAMTS10Q9H324 1103 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms