RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 LRRC53A6NM62 1247 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 H3BRB1 525 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 EDN1P05305 212 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 SRGAP2CP0DJJ0 459 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 KLRC1P26715 233 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 PSMC4P43686 418 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 CLCN3P51790 818 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 EFNA5P52803 228 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 MCCD1P59942 119 aaPredicted RBP11.24□□□□□ -0.61
ATRX-216ENST00000624403 POLR2FP61218 127 aaKnown RBP11.24□□□□□ -0.61
ATRX-216ENST00000624403 CDK17Q00537 523 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 MYL7Q01449 175 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 SNRNP35Q16560 246 aaKnown RBP11.24□□□□□ -0.61
ATRX-216ENST00000624403 DGKDQ16760 1214 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 CBWD6Q4V339 395 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 CBWD3Q5JTY5 395 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 CBWD5Q5RIA9 395 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 KLHDC7AQ5VTJ3 777 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 CDCA2Q69YH5 1023 aaPredicted RBP11.24□□□□□ -0.61
ATRX-216ENST00000624403 EFCAB12Q6NXP0 572 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 TLK2Q86UE8 772 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 METTL13Q8N6R0 699 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 FBXL18Q96ME1 805 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 INTS2Q9H0H0 1204 aaKnown RBP11.24□□□□□ -0.61
ATRX-216ENST00000624403 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 TUT1Q9H6E5 874 aaKnown RBP11.24□□□□□ -0.61
ATRX-216ENST00000624403 SIX2Q9NPC8 291 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 NLRC4Q9NPP4 1024 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 GCNT4Q9P109 453 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 STYXL1Q9Y6J8 313 aa11.24□□□□□ -0.61
ATRX-216ENST00000624403 A6NJR5 290 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 MAGEB2O15479 319 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 GJB1P08034 283 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 CCDC175P0C221 793 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 TNNT1P13805 278 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 LACTBP83111 547 aaPredicted RBP11.23□□□□□ -0.61
ATRX-216ENST00000624403 CYP24A1Q07973 514 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 TFDP1Q14186 410 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 PTPN14Q15678 1187 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 RHPN2Q8IUC4 686 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 ZBTB8OSQ8IWT0 167 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 GPD1LQ8N335 351 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 LINC01465Q8N7H1 131 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 RNF149Q8NC42 400 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 ACRBPQ8NEB7 543 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 TRPV1Q8NER1 839 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 MFSD14AQ96MC6 490 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 FAM213AQ9BRX8 229 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 TARS2Q9BW92 718 aaKnown RBP11.23□□□□□ -0.61
ATRX-216ENST00000624403 HAPLN2Q9GZV7 340 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 C2orf40Q9H1Z8 148 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 AJAP1Q9UKB5 411 aaPredicted RBP11.23□□□□□ -0.61
ATRX-216ENST00000624403 GABRQQ9UN88 632 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 PLAGL2Q9UPG8 496 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 FHOD1Q9Y613 1164 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 EPN1Q9Y6I3 576 aaPredicted RBP11.23□□□□□ -0.61
ATRX-216ENST00000624403 SIP14410 1827 aa11.23□□□□□ -0.61
ATRX-216ENST00000624403 KIAA0391O15091 583 aaKnown RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 ASAP2O43150 1006 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 EXTL3O43909 919 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 N4BP1O75113 896 aaKnown RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 NDUFA10O95299 355 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 TBC1D8O95759 1140 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 PRKCBP05771 671 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 UCHL3P15374 230 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 GCLMP48507 274 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 PPFIA1Q13136 1202 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 GRIK4Q16099 956 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 SFMBT2Q5VUG0 894 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 SLFN12LQ6IEE8 588 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 TRIM65Q6PJ69 517 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 MTHFD1LQ6UB35 978 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 ZPBP2Q6X784 338 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 SYN2Q92777 582 aaPredicted RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 CCDC127Q96BQ5 260 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 ZNF668Q96K58 619 aaPredicted RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 ZBTB45Q96K62 511 aaPredicted RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 NLRP4Q96MN2 994 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 PHOX2BQ99453 314 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 AP5M1Q9H0R1 490 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 NUCKS1Q9H1E3 243 aaKnown RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 NHEJ1Q9H9Q4 299 aaPredicted RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 KIAA1586Q9HCI6 787 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 ARHGAP20Q9P2F6 1191 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 AGO2Q9UKV8 859 aaKnown RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
ATRX-216ENST00000624403 Q9Y3F1 56 aa11.22□□□□□ -0.61
ATRX-216ENST00000624403 A0A0B4J269 797 aa11.21□□□□□ -0.61
ATRX-216ENST00000624403 A0A0U1RQJ8 604 aa11.21□□□□□ -0.61
ATRX-216ENST00000624403 GOLGA6L9A6NEM1 432 aa11.21□□□□□ -0.61
ATRX-216ENST00000624403 ZNF233A6NK53 670 aa11.21□□□□□ -0.61
ATRX-216ENST00000624403 LRRIQ3A6PVS8 624 aaPredicted RBP11.21□□□□□ -0.61
ATRX-216ENST00000624403 P4HA2O15460 535 aa11.21□□□□□ -0.61
ATRX-216ENST00000624403 MSCO60682 206 aa11.21□□□□□ -0.61
ATRX-216ENST00000624403 F2P00734 622 aa11.21□□□□□ -0.61
ATRX-216ENST00000624403 PLEKP08567 350 aaPredicted RBP11.21□□□□□ -0.61
ATRX-216ENST00000624403 CFHP08603 1231 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms