RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 FBXO22Q8NEZ5 403 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 MYRIPQ8NFW9 859 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 RASSF8Q8NHQ8 419 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 MAFAQ8NHW3 353 aaPredicted RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 SPIRE2Q8WWL2 714 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 NLRP7Q8WX94 980 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 MRPS27Q92552 414 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 DDX12PQ92771 950 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 KIFAP3Q92845 792 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PGBD4Q96DM1 585 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 MRPL38Q96DV4 380 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PAGE5Q96GU1 130 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 CCDC43Q96MW1 224 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 CDCA3Q99618 268 aaPredicted RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 ADAM2Q99965 735 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 STRA6Q9BX79 667 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 TRIM9Q9C026 710 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 NUP62CLQ9H1M0 184 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 C2orf40Q9H1Z8 148 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 BLZF1Q9H2G9 400 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 TNMDQ9H2S6 317 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 FZD8Q9H461 694 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 RC3H2Q9HBD1 1191 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 ARHGAP28Q9P2N2 729 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PUF60Q9UHX1 559 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 LRFN2Q9ULH4 789 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 YBX2Q9Y2T7 364 aaKnown RBP5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PCDHB7Q9Y5E2 793 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PCDHB12Q9Y5F1 795 aa5.77□□□□□ -1.49
SHMT1-211ENST00000618902 PIEZO1Q92508 2521 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 LINC01553A4QN01 128 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 TISP43B9A030 160 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 H0YCG3 227 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 INO80B-WBP1J3KQ70 363 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 MEFVO15553 781 aaPredicted RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 B4GALT3O60512 393 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 NR1I2O75469 434 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 PPP1R37O75864 691 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 ZNF202O95125 648 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 SLFN14P0C7P3 912 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 LINC00271P0C7V0 271 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 MAPTP10636 758 aaKnown RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 PLS3P13797 630 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 ARF4P18085 180 aaPredicted RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 HOXD13P35453 343 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 BMPR1AP36894 532 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 TXLNAP40222 546 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 NAMPTP43490 491 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 AFMP43652 599 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 PHKA2P46019 1235 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 CASP5P51878 434 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 NCKAP1LP55160 1127 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 MRPS5P82675 430 aaKnown RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 PLCB3Q01970 1234 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 KRT17Q04695 432 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 EHHADHQ08426 723 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 KCNA1Q09470 495 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 COL19A1Q14993 1142 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 FAM187BQ17R55 369 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 ZC2HC1CQ53FD0 456 aaPredicted RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 DNTTIP2Q5QJE6 756 aaKnown RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 FAM117BQ6P1L5 589 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 CNNM4Q6P4Q7 775 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 SLC39A4Q6P5W5 647 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 SARM1Q6SZW1 724 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 KRBA2Q6ZNG9 492 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 CATSPER4Q7RTX7 472 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 TMEM192Q8IY95 271 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 ELOA2Q8IYF1 753 aaPredicted RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 ABI1Q8IZP0 508 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 MICALL1Q8N3F8 863 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 IQUBQ8NA54 791 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 CPB2Q96IY4 423 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 ZBTB45Q96K62 511 aaPredicted RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 SCLT1Q96NL6 688 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 C7orf25Q9BPX7 421 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 NTPCRQ9BSD7 190 aaKnown RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 EIF2AQ9BY44 585 aaKnown RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 HAPLN2Q9GZV7 340 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 TMEM117Q9H0C3 514 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 CXCL16Q9H2A7 254 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 NKX2-4Q9H2Z4 354 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 KCND1Q9NSA2 647 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 AGPAT5Q9NUQ2 364 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 FAM13BQ9NYF5 915 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.76□□□□□ -1.49
SHMT1-211ENST00000618902 TBC1D7Q9P0N9 293 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 HCSTQ9UBK5 93 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 DPP7Q9UHL4 492 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 MTCH2Q9Y6C9 303 aa5.76□□□□□ -1.49
SHMT1-211ENST00000618902 GBF1Q92538 1859 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 CCDC169A6NNP5 214 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 ANKRD63C9JTQ0 380 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 ACKR2O00590 384 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 INPPL1O15357 1258 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 CCP110O43303 1012 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 FAM13AO94988 1023 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 UPP2O95045 317 aa5.75□□□□□ -1.49
SHMT1-211ENST00000618902 PRKCBP05771 671 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms