RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 BZW2Q9Y6E2 419 aaKnown RBP23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 SKAP2O75563 359 aaPredicted RBP23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 GNA14O95837 355 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 ALDH1A1P00352 501 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 AGTP01019 485 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 NCALDP61601 193 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 ASIC2Q16515 512 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 RIOX2Q8IUF8 465 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 REM2Q8IYK8 340 aaPredicted RBP23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 CALML4Q96GE6 196 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 LRRC27Q9C0I9 530 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 SUCLA2Q9P2R7 463 aaPredicted RBP23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 PNMA2Q9UL42 364 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 A0A087X0T9 212 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 FAM228BP0C875 321 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 KLHL30Q0D2K2 578 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 NSMFQ6X4W1 530 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 LRRC34Q8IZ02 419 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 MDM1Q8TC05 714 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 GTF3C2Q8WUA4 911 aaPredicted RBP23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 FMO2Q99518 471 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 TMEM109Q9BVC6 243 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 L3MBTL1Q9Y468 752 aa23.6■■□□□ 1.37
POLR2J3-220ENST00000613744 DIAPH2O60879 1101 aa23.59■■□□□ 1.37
POLR2J3-220ENST00000613744 PDE6CP51160 858 aa23.59■■□□□ 1.37
POLR2J3-220ENST00000613744 C17orf99Q6UX52 265 aa23.59■■□□□ 1.37
POLR2J3-220ENST00000613744 SYCE1Q8N0S2 351 aa23.59■■□□□ 1.37
POLR2J3-220ENST00000613744 CEP63Q96MT8 703 aa23.59■■□□□ 1.37
POLR2J3-220ENST00000613744 NLRC4Q9NPP4 1024 aa23.59■■□□□ 1.37
POLR2J3-220ENST00000613744 DIS3Q9Y2L1 958 aaKnown RBP23.59■■□□□ 1.37
POLR2J3-220ENST00000613744 COL4A3BPQ9Y5P4 624 aa23.59■■□□□ 1.37
POLR2J3-220ENST00000613744 A0A0A6YYK5 440 aaPredicted RBP23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 CAND2O75155 1236 aa23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 OAS1P00973 400 aaKnown RBP23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 RARAP10276 462 aa23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 BCRP11274 1271 aa23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 PECAM1P16284 738 aaPredicted RBP23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 FAM110CQ1W6H9 321 aa23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 CMPK2Q5EBM0 449 aa23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 SLFN11Q7Z7L1 901 aa23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 DDX47Q9H0S4 455 aaKnown RBP23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 INTS9Q9NV88 658 aaKnown RBP23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 MORF4L1Q9UBU8 362 aa23.58■■□□□ 1.37
POLR2J3-220ENST00000613744 MARSP56192 900 aaKnown RBP23.58■■□□□ 1.36
POLR2J3-220ENST00000613744 INF2Q27J81 1249 aa23.58■■□□□ 1.36
POLR2J3-220ENST00000613744 C6orf118Q5T5N4 469 aa23.58■■□□□ 1.36
POLR2J3-220ENST00000613744 METTL13Q8N6R0 699 aa23.58■■□□□ 1.36
POLR2J3-220ENST00000613744 DNAJC5GQ8N7S2 189 aa23.58■■□□□ 1.36
POLR2J3-220ENST00000613744 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.58■■□□□ 1.36
POLR2J3-220ENST00000613744 LSM14BQ9BX40 385 aaKnown RBP23.58■■□□□ 1.36
POLR2J3-220ENST00000613744 ADAM7Q9H2U9 754 aa23.58■■□□□ 1.36
POLR2J3-220ENST00000613744 O00370 1275 aa23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 ALDH5A1P51649 535 aaPredicted RBP23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 NPEPPSP55786 919 aa23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 FKBP3Q00688 224 aaKnown RBP23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 POU5F1Q01860 360 aaKnown RBP23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 CLUL1Q15846 466 aa23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 NEK9Q8TD19 979 aa23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 ELAC2Q9BQ52 826 aaKnown RBP23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 PABPC3Q9H361 631 aaKnown RBP23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 ACAD9Q9H845 621 aa23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 CPSF2Q9P2I0 782 aaKnown RBP23.57■■□□□ 1.36
POLR2J3-220ENST00000613744 MEIS2O14770 477 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 SNX3O60493 162 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 POLR2FP61218 127 aaKnown RBP23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 LACTBP83111 547 aaPredicted RBP23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 BNIP1Q12981 228 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 TRAF1Q13077 416 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 ARHGEF3Q9NR81 526 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 INTUQ9ULD6 942 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 AGAP1Q9UPQ3 857 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 STXBP5LQ9Y2K9 1186 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 FAM187AA6NFU0 413 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 TULP1O00294 542 aaPredicted RBP23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 GBP1P32455 592 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 DRG2P55039 364 aaKnown RBP23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 FAM133BQ5BKY9 247 aaKnown RBP23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 SLC30A10Q6XR72 485 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 KRT25Q7Z3Z0 450 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 SELENOSQ9BQE4 189 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 AP1M1Q9BXS5 423 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 PACSIN1Q9BY11 444 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 ECT2Q9H8V3 914 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 ZFATQ9P243 1243 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 AMACRQ9UHK6 382 aa23.56■■□□□ 1.36
POLR2J3-220ENST00000613744 EME2A4GXA9 379 aaPredicted RBP23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 E7ENQ6 273 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 SLC25A27O95847 323 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 NEFHP12036 1026 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 ATP2A2P16615 1042 aaKnown RBP23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 SKIV2L2P42285 1042 aaKnown RBP23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 COPS2P61201 443 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 CCNA1P78396 465 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 BAATQ14032 418 aaPredicted RBP23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 NONOQ15233 471 aaKnown RBP eCLIP23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 TPCN2Q8NHX9 752 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 ADAMTS1Q9UHI8 967 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 USP15Q9Y4E8 981 aaPredicted RBP23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 THSD7BQ9C0I4 1608 aa23.55■■□□□ 1.36
POLR2J3-220ENST00000613744 TTI1O43156 1089 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms