RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 HNRNPH3P31942 346 aaKnown RBP9.71□□□□□ -0.86
CCDC47-207ENST00000612558 CYP2C19P33261 490 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 FMO5P49326 533 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 LIG4P49917 911 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 VAMP7P51809 220 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 CDK17Q00537 523 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 LAMTOR4Q0VGL1 99 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 DRP2Q13474 957 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 CAPSQ13938 189 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 CCL14Q16627 93 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 EXOC3L4Q17RC7 722 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 DNTTIP2Q5QJE6 756 aaKnown RBP9.71□□□□□ -0.86
CCDC47-207ENST00000612558 SLFN12LQ6IEE8 588 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 EFCAB12Q6NXP0 572 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 SLC39A4Q6P5W5 647 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 WDR59Q6PJI9 974 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-207ENST00000612558 CACNA2D4Q7Z3S7 1137 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 POMGNT1Q8WZA1 660 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 FBXL18Q96ME1 805 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 SUCLA2Q9P2R7 463 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-207ENST00000612558 PLAGL2Q9UPG8 496 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 FCF1Q9Y324 198 aaKnown RBP9.71□□□□□ -0.86
CCDC47-207ENST00000612558 Q9Y3F1 56 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 STYXL1Q9Y6J8 313 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 PHLPP2Q6ZVD8 1323 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 KAT6AQ92794 2004 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 EVPLQ92817 2033 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 MGAMO43451 1857 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 GOLGA6L9A6NEM1 432 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 ADCY6O43306 1168 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 NOL4O94818 638 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 C22orf31O95567 290 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 ZNF286BP0CG31 522 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 SLC9A1P19634 815 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 KLRC1P26715 233 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 PON1P27169 355 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 CTGFP29279 349 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 PSMC4P43686 418 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 LACTBP83111 547 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-207ENST00000612558 ENPEPQ07075 957 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 TFDP1Q14186 410 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 HSP90AA2PQ14568 343 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-207ENST00000612558 MTF1Q14872 753 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 PTPN14Q15678 1187 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 SNRNP35Q16560 246 aaKnown RBP9.7□□□□□ -0.86
CCDC47-207ENST00000612558 CDCA2Q69YH5 1023 aaPredicted RBP9.7□□□□□ -0.86
CCDC47-207ENST00000612558 RAD9BQ6WBX8 426 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 TOGARAM2Q6ZUX3 1019 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 RRAGAQ7L523 313 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 USP37Q86T82 979 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 ZBTB8OSQ8IWT0 167 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 LRRC71Q8N4P6 559 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 METTL13Q8N6R0 699 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 TRAPPC12Q8WVT3 735 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 BAP1Q92560 729 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 PPP1R13BQ96KQ4 1090 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 CAPNS2Q96L46 248 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 CHP1Q99653 195 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 C2orf40Q9H1Z8 148 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 KIAA1586Q9HCI6 787 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 TOR4AQ9NXH8 423 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 FBXL5Q9UKA1 691 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 PPP2R2CQ9Y2T4 447 aa9.7□□□□□ -0.86
CCDC47-207ENST00000612558 GOLGA8IPA6NC78 632 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 GOLGA8JA6NMD2 632 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 PMM2O15305 246 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 P4HA2O15460 535 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 N4BP1O75113 896 aaKnown RBP9.69□□□□□ -0.86
CCDC47-207ENST00000612558 TUBB4AP04350 444 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 CCDC175P0C221 793 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 TRIM49P0CI25 452 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 TRIM49CP0CI26 452 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 SRGAP2CP0DJJ0 459 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 TMOD1P28289 359 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 POLR2FP61218 127 aaKnown RBP9.69□□□□□ -0.86
CCDC47-207ENST00000612558 IGBP1P78318 339 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 POU5F1BQ06416 359 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 CETN1Q12798 172 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 KLHDC7AQ5VTJ3 777 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 DPY19L2P1Q6NXN4 242 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 PDXDC1Q6P996 788 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 TLK2Q86UE8 772 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 RHPN2Q8IUC4 686 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 CBWD2Q8IUF1 395 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 CCDC170Q8IYT3 715 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 GPD1LQ8N335 351 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 RNF149Q8NC42 400 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 SYN2Q92777 582 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-207ENST00000612558 SAAL1Q96ER3 474 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 C16orf45Q96MC5 204 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-207ENST00000612558 MFSD14AQ96MC6 490 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 AP5M1Q9H0R1 490 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 GANQ9H2C0 597 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 GCNT4Q9P109 453 aa9.69□□□□□ -0.86
CCDC47-207ENST00000612558 EPN1Q9Y6I3 576 aaPredicted RBP9.69□□□□□ -0.86
CCDC47-207ENST00000612558 RRN3P2A6NIE6 340 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 ZNF233A6NK53 670 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 LRRC53A6NM62 1247 aa9.68□□□□□ -0.86
CCDC47-207ENST00000612558 KIF2AO00139 706 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms