RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 CBWD1Q9BRT8 395 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTCFL-216ENST00000608263 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 DISP2A7MBM2 1401 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 MRC1P22897 1456 aa11.08□□□□□ -0.64
CTCFL-216ENST00000608263 MIF4GDA9UHW6 222 aaKnown RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 GOLGA8RI6L899 631 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 CHRNA3P32297 505 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 PPM1FP49593 454 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 IL9RQ01113 521 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 CLUL1Q15846 466 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 BBS9Q3SYG4 887 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 ZBTB33Q86T24 672 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SPIRE2Q8WWL2 714 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SYN2Q92777 582 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 IWS1Q96ST2 819 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 NXF1Q9UBU9 619 aaKnown RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 DDX20Q9UHI6 824 aaKnown RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 PLSCR1O15162 318 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 KRT1P04264 644 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SRGAP2CP0DJJ0 459 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 CALRP27797 417 aaKnown RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 HGSNATQ68CP4 663 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 TMEM270Q6UE05 265 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SCYL3Q8IZE3 742 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 GRK7Q8WTQ7 553 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 KAT5Q92993 513 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SLC35C1Q96A29 364 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SMC6Q96SB8 1091 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 ETNK1Q9HBU6 452 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 AGPAT3Q9NRZ7 376 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 TOPAZ1Q8N9V7 1692 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 PJA2O43164 708 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SGPL1O95470 568 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 IRX4P78413 519 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 C6orf163Q5TEZ5 329 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 RFX8Q6ZV50 586 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 PRPF38AQ8NAV1 312 aaKnown RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SLC7A3Q8WY07 619 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 NLRP4Q96MN2 994 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 ECT2Q9H8V3 914 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 GDF3Q9NR23 364 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 AIPL1Q9NZN9 384 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 ADAM22Q9P0K1 906 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 SUCLA2Q9P2R7 463 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-216ENST00000608263 KDM3BQ7LBC6 1761 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 LRRC37A3O60309 1634 aa11.07□□□□□ -0.64
CTCFL-216ENST00000608263 GRIN3BO60391 1043 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CELF2O95319 508 aaKnown RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 ARP10275 920 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 HSPA6P17066 643 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 YWHAGP61981 247 aaKnown RBP eCLIP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 IFRD2Q12894 506 aaPredicted RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 NBPF12Q5TAG4 269 aaPredicted RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CASC4Q6P4E1 433 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 C4orf33Q8N1A6 199 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 KRT35Q92764 455 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 ACSF2Q96CM8 615 aaPredicted RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 RILPQ96NA2 401 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 NCAPGQ9BPX3 1015 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 DNAI2Q9GZS0 605 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 ZWILCHQ9H900 591 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 TMEM120BA0PK00 339 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 DCDC2CA8MYV0 355 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 SHBGP04278 402 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 FGRP09769 529 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 SCP2P22307 547 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 GBP1P32455 592 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 RHBDL3P58872 404 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 BASP1P80723 227 aaKnown RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 MTMR1Q13613 665 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 TMEM119Q4V9L6 283 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CYB5D1Q6P9G0 228 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 ARHGEF18Q6ZSZ5 1173 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 RPAINQ86UA6 219 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 MAIP1Q8WWC4 291 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 INPP4AQ96PE3 977 aaPredicted RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CXorf56Q9H5V9 222 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 HSPBP1Q9NZL4 362 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 PITPNM2Q9BZ72 1349 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 NOL4O94818 638 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 SHMT1P34896 483 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 RCN2Q14257 317 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 PPP2R5AQ15172 486 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CBWD6Q4V339 395 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CBWD3Q5JTY5 395 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CBWD5Q5RIA9 395 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 LRIG3Q6UXM1 1119 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 LDHDQ86WU2 507 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 DHX38Q92620 1227 aaKnown RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 KLF6Q99612 283 aaPredicted RBP11.06□□□□□ -0.64
CTCFL-216ENST00000608263 CALN1Q9BXU9 219 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 SLIT3O75094 1523 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 A0A0G2JND7 137 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 FAM187AA6NFU0 413 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 F8VZ95 297 aa11.06□□□□□ -0.64
CTCFL-216ENST00000608263 BAG2O95816 211 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms