RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	TMEM169	Q96HH4	297 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	MMTAG2	Q9BU76	263 aa	Known RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	CCDC113	Q9H0I3	377 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	C2orf40	Q9H1Z8	148 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	ATG2A	Q2TAZ0	1938 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	ARL5C	A6NH57	179 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	LOC730098	B7Z3J9	87 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	ACKR2	O00590	384 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	PER2	O15055	1255 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	USO1	O60763	962 aa	Known RBP	11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	CXCL14	O95715	111 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	ITGA4	P13612	1032 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	IBSP	P21815	317 aa	Predicted RBP	11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	GJB2	P29033	226 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	CCT6A	P40227	531 aa	Known RBP	11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	SLC11A1	P49279	550 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	NDUFV1	P49821	464 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	EFNA5	P52803	228 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	NBR1	Q14596	966 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	BMS1	Q14692	1282 aa	Known RBP	11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	PPP2R5A	Q15172	486 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	ANKRD54	Q6NXT1	300 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	SYCE2	Q6PIF2	218 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	DTHD1	Q6ZMT9	781 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	RBM23	Q86U06	439 aa	Known RBP	11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	COLGALT2	Q8IYK4	626 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	VPS52	Q8N1B4	723 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	URGCP	Q8TCY9	931 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	CCDC43	Q96MW1	224 aa	Known RBP	11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	VN1R3	Q9BXE9	311 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	EIF2A	Q9BY44	585 aa	Known RBP	11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	C17orf75	Q9HAS0	396 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	GPRC5C	Q9NQ84	441 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	DNAJB4	Q9UDY4	337 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	CACNA1H	O95180	2353 aa		11.86	□□□□□ -0.51
TPM2-208	ENST00000607559	PLXNA4	Q9HCM2	1894 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	ARHGEF35	A5YM69	484 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	FAM86C2P	A6NEL3	165 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	NT5C1B-RDH14	C9J2C7	533 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	NRP1	O14786	923 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	B4GALT5	O43286	388 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	CLASP2	O75122	1294 aa	Known RBP	11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	SRGAP2B	P0DMP2	458 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	RNASEL	Q05823	741 aa	Known RBP	11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	CAMK2B	Q13554	666 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	C1orf186	Q6ZWK4	172 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	HACE1	Q8IYU2	909 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	SLC22A17	Q8WUG5	538 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	BSND	Q8WZ55	320 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	CASP10	Q92851	521 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	CPB2	Q96IY4	423 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	TIPIN	Q9BVW5	301 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	PHF7	Q9BWX1	381 aa	Predicted RBP	11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	RHOBTB2	Q9BYZ6	727 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	BHMT2	Q9H2M3	363 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	ENTPD7	Q9NQZ7	604 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	CHST7	Q9NS84	486 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	MIOS	Q9NXC5	875 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	KIAA1024	Q9UPX6	916 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	DNM3	Q9UQ16	869 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	FAN1	Q9Y2M0	1017 aa		11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	USP15	Q9Y4E8	981 aa	Predicted RBP	11.85	□□□□□ -0.51
TPM2-208	ENST00000607559	ZNF318	Q5VUA4	2279 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	LRRIQ4	A6NIV6	560 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	GUCY2C	P25092	1073 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	ITIH3	Q06033	890 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	CLUL1	Q15846	466 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	E2F4	Q16254	413 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	MAPK6	Q16659	721 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	LONRF3	Q496Y0	759 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	PLPP4	Q5VZY2	271 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	KRT79	Q5XKE5	535 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	LARP1B	Q659C4	914 aa	Known RBP	11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	ZBTB8OS	Q8IWT0	167 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	DAW1	Q8N136	415 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	AK8	Q96MA6	479 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	GAD1	Q99259	594 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	BACH2	Q9BYV9	841 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	ADAM7	Q9H2U9	754 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	TMEM134	Q9H6X4	195 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	RXFP1	Q9HBX9	757 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	DDX19A	Q9NUU7	478 aa	Known RBP	11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	KCNG1	Q9UIX4	513 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	RBM19	Q9Y4C8	960 aa	Known RBP	11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	HCFC2	Q9Y5Z7	792 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	PHLPP2	Q6ZVD8	1323 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	TECTA	O75443	2155 aa		11.84	□□□□□ -0.51
TPM2-208	ENST00000607559	ARID2	Q68CP9	1835 aa		11.83	□□□□□ -0.51
TPM2-208	ENST00000607559	N4BP3	O15049	544 aa		11.83	□□□□□ -0.52
TPM2-208	ENST00000607559	CSPG5	O95196	566 aa		11.83	□□□□□ -0.52
TPM2-208	ENST00000607559	BMP15	O95972	392 aa		11.83	□□□□□ -0.52
TPM2-208	ENST00000607559	SOD2	P04179	222 aa		11.83	□□□□□ -0.52
TPM2-208	ENST00000607559	RBM10	P98175	930 aa	Known RBP	11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms