RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PRG3Q9Y2Y8 225 aaPredicted RBP11.78□□□□□ -0.52
TUBE1-210ENST00000604967 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 RECQL4O94761 1208 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 GUCY2CP25092 1073 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 PPM1AP35813 382 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 ALDH7A1P49419 539 aaKnown RBP11.77□□□□□ -0.53
TUBE1-210ENST00000604967 CEBPZQ03701 1054 aaKnown RBP11.77□□□□□ -0.53
TUBE1-210ENST00000604967 ZP2Q05996 745 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 COASYQ13057 564 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 PRPF4BQ13523 1007 aaKnown RBP11.77□□□□□ -0.53
TUBE1-210ENST00000604967 MCM6Q14566 821 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 PTPN14Q15678 1187 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 SMAD2Q15796 467 aaKnown RBP11.77□□□□□ -0.53
TUBE1-210ENST00000604967 CD300LGQ6UXG3 332 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 TMEM184AQ6ZMB5 413 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 TMC7Q7Z402 723 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 TMEM161BQ8NDZ6 487 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 DEPTORQ8TB45 409 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 KIFAP3Q92845 792 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 CHAMP1Q96JM3 812 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 PRIMPOLQ96LW4 560 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 FIZ1Q96SL8 496 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 ACO2Q99798 780 aaKnown RBP11.77□□□□□ -0.53
TUBE1-210ENST00000604967 NTPCRQ9BSD7 190 aaKnown RBP11.77□□□□□ -0.53
TUBE1-210ENST00000604967 TARS2Q9BW92 718 aaKnown RBP11.77□□□□□ -0.53
TUBE1-210ENST00000604967 APOL5Q9BWW9 433 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 IKZF4Q9H2S9 585 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 ENTPD7Q9NQZ7 604 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 CD207Q9UJ71 328 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 GIT1Q9Y2X7 761 aa11.77□□□□□ -0.53
TUBE1-210ENST00000604967 SLC16A4O15374 487 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 STX6O43752 255 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 CXCL14O95715 111 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 SSBP05455 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
TUBE1-210ENST00000604967 CTSAP10619 480 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 EPCAMP16422 314 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 PROZP22891 400 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 NDUFV1P49821 464 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 RNASELQ05823 741 aaKnown RBP11.76□□□□□ -0.53
TUBE1-210ENST00000604967 SMAD4Q13485 552 aaKnown RBP11.76□□□□□ -0.53
TUBE1-210ENST00000604967 MAPK6Q16659 721 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 ZBTB8OSQ8IWT0 167 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 C12orf76Q8N812 135 aaPredicted RBP11.76□□□□□ -0.53
TUBE1-210ENST00000604967 CNNM3Q8NE01 707 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 URGCPQ8TCY9 931 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 SLC22A17Q8WUG5 538 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 SUSD6Q92537 303 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 REEP2Q9BRK0 252 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 GPR62Q9BZJ7 368 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 C2orf40Q9H1Z8 148 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 CDT1Q9H211 546 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 NGRNQ9NPE2 291 aaKnown RBP11.76□□□□□ -0.53
TUBE1-210ENST00000604967 PARP2Q9UGN5 583 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 GDAQ9Y2T3 454 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 USP15Q9Y4E8 981 aaPredicted RBP11.76□□□□□ -0.53
TUBE1-210ENST00000604967 HCFC2Q9Y5Z7 792 aa11.76□□□□□ -0.53
TUBE1-210ENST00000604967 CCDC169A6NNP5 214 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 N4BP3O15049 544 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 NCK2O43639 380 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 WEE2P0C1S8 567 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 MAPTP10636 758 aaKnown RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 SOX4Q06945 474 aaPredicted RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 GIT2Q14161 759 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 DHX8Q14562 1220 aaKnown RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 SMC1AQ14683 1233 aaKnown RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 SEZ6Q53EL9 994 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 GLRA4Q5JXX5 417 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 ATF7IP2Q5U623 682 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 FOXD4L5Q5VV16 416 aaPredicted RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 KIAA0319Q5VV43 1072 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 PDE12Q6L8Q7 609 aaKnown RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 ANKRD54Q6NXT1 300 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 SLC39A4Q6P5W5 647 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 GJD3Q8N144 294 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 FOXD4L4Q8WXT5 416 aaPredicted RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 RAD54LQ92698 747 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 AK8Q96MA6 479 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 ZMAT2Q96NC0 199 aaKnown RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 TMEM175Q9BSA9 504 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 RAPGEFL1Q9UHV5 662 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 TNFSF13BQ9Y275 285 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 FAN1Q9Y2M0 1017 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 SRPRBQ9Y5M8 271 aaKnown RBP11.75□□□□□ -0.53
TUBE1-210ENST00000604967 IRAK3Q9Y616 596 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
TUBE1-210ENST00000604967 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.74□□□□□ -0.53
TUBE1-210ENST00000604967 CASTOR2A6NHX0 329 aa11.74□□□□□ -0.53
TUBE1-210ENST00000604967 K7ERI5 159 aa11.74□□□□□ -0.53
TUBE1-210ENST00000604967 CNPP09543 421 aaKnown RBP11.74□□□□□ -0.53
TUBE1-210ENST00000604967 PLS3P13797 630 aa11.74□□□□□ -0.53
TUBE1-210ENST00000604967 PDCP20941 246 aa11.74□□□□□ -0.53
TUBE1-210ENST00000604967 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
TUBE1-210ENST00000604967 OR1G1P47890 313 aa11.74□□□□□ -0.53
TUBE1-210ENST00000604967 ZNF131P52739 623 aa11.74□□□□□ -0.53
TUBE1-210ENST00000604967 KRT17Q04695 432 aa11.74□□□□□ -0.53
TUBE1-210ENST00000604967 SLC39A14Q15043 492 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms