RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 RASA1P20936 1047 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 S100A12P80511 92 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 MTX1Q13505 466 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 DIP2AQ14689 1571 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 DPCR1Q3MIW9 517 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 FBXO43Q4G163 708 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 SPDYAQ5MJ70 313 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ZNF449Q6P9G9 518 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 IDO2Q6ZQW0 420 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 FLAD1Q8NFF5 587 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 SECISBP2Q96T21 854 aaKnown RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 TM6SF1Q9BZW5 370 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 SLC12A5Q9H2X9 1139 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 USP29Q9HBJ7 922 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 RXFP1Q9HBX9 757 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 NEK6Q9HC98 313 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 MOV10Q9HCE1 1003 aaKnown RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 PLK2Q9NYY3 685 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ZNF212Q9UDV6 495 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 POLG2Q9UHN1 485 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 SLC4A4Q9Y6R1 1079 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ANKARQ7Z5J8 1434 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 UMODL1Q5DID0 1318 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 A0A1W2PQ27 194 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 A0A1W2PQ64 194 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 A0A1W2PQD8 194 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 GPC4O75487 556 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 RSL1D1O76021 490 aaKnown RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ITGB3P05106 788 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 PSMA4P25789 261 aaKnown RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 MAP3K7CLP57077 242 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 WDR44Q5JSH3 913 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 RWDD4Q6NW29 188 aaKnown RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 RAD9BQ6WBX8 426 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ACAD11Q709F0 780 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ALLCQ8N6M5 410 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 PDZD8Q8NEN9 1154 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 NXPE3Q969Y0 559 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ZNF274Q96GC6 653 aaPredicted RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 CALN1Q9BXU9 219 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 NIFKQ9BYG3 293 aaKnown RBP9.43□□□□□ -0.9
COMMD3-215ENST00000602574 IFT22Q9H7X7 185 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 FANCFQ9NPI8 374 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 ASIC3Q9UHC3 531 aa9.43□□□□□ -0.9
COMMD3-215ENST00000602574 GOLGA8QA0A0J9YX86 632 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 GOLGA8OA6NCC3 632 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 LRRC72A6NJI9 287 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 GOLGA8NF8WBI6 632 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 IRS4O14654 1257 aaPredicted RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 UNC5CO95185 931 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 GJB6O95452 261 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 ADSLP30566 484 aaPredicted RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 ALDH18A1P54886 795 aaKnown RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 PLTPP55058 493 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 SNX16P57768 344 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 NOP14P78316 857 aaKnown RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 TMEM266Q2M3C6 531 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 SHEQ5VZ18 495 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 USP43Q70EL4 1123 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 HEATR4Q86WZ0 1026 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 TMTC1Q8IUR5 882 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 SPATA2LQ8IUW3 424 aaPredicted RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 OR10Z1Q8NGY1 313 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 AFG1LQ8WV93 481 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 RASSF5Q8WWW0 418 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 DPF2Q92785 391 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 ACAP3Q96P50 834 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 HAUS4Q9H6D7 363 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 TBC1D23Q9NUY8 699 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 EMC3Q9P0I2 261 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 STK38LQ9Y2H1 464 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 STXBP5LQ9Y2K9 1186 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 NEO1Q92859 1461 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 A0A0G2JS52 829 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 A0A1W2PRQ8 180 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 PLEKHG3A1L390 1219 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 PHF20L1A8MW92 1017 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 MIF4GDA9UHW6 222 aaKnown RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 VILLO15195 856 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 AQP9O43315 295 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 ADAMTS4O75173 837 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 DDHD2O94830 711 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 FOSP01100 380 aaPredicted RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 NUDT1P36639 197 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 UBXN1Q04323 297 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 RESTQ13127 1097 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 TNNI3KQ59H18 835 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 IGSF11Q5DX21 431 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 PPP6R3Q5H9R7 873 aaPredicted RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 TMEM63BQ5T3F8 832 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 ADAMTSL2Q86TH1 951 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 FAM83AQ86UY5 434 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 SHCBP1Q8NEM2 672 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 CHPT1Q8WUD6 406 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 FAM149B1Q96BN6 582 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 RPRD1AQ96P16 312 aaPredicted RBP9.42□□□□□ -0.9
COMMD3-215ENST00000602574 TRIM55Q9BYV6 548 aa9.42□□□□□ -0.9
COMMD3-215ENST00000602574 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms