RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 MYH11P35749 1972 aa18.25■□□□□ 0.51
USHBP1-210ENST00000600286 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.25■□□□□ 0.51
USHBP1-210ENST00000600286 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.25■□□□□ 0.51
USHBP1-210ENST00000600286 BIN1O00499 593 aa18.25■□□□□ 0.51
USHBP1-210ENST00000600286 KIAA0391O15091 583 aaKnown RBP18.25■□□□□ 0.51
USHBP1-210ENST00000600286 CALUO43852 315 aaPredicted RBP18.25■□□□□ 0.51
USHBP1-210ENST00000600286 LDHAP00338 332 aaKnown RBP18.25■□□□□ 0.51
USHBP1-210ENST00000600286 HARSP12081 509 aaKnown RBP18.25■□□□□ 0.51
USHBP1-210ENST00000600286 BMT2Q1RMZ1 405 aa18.25■□□□□ 0.51
USHBP1-210ENST00000600286 ISM2Q6H9L7 571 aa18.25■□□□□ 0.51
USHBP1-210ENST00000600286 SASS6Q6UVJ0 657 aa18.25■□□□□ 0.51
USHBP1-210ENST00000600286 CDR2LQ86X02 465 aaPredicted RBP18.25■□□□□ 0.51
USHBP1-210ENST00000600286 MSTO1Q9BUK6 570 aa18.25■□□□□ 0.51
USHBP1-210ENST00000600286 CXXC1Q9P0U4 656 aaPredicted RBP18.25■□□□□ 0.51
USHBP1-210ENST00000600286 PARP2Q9UGN5 583 aa18.25■□□□□ 0.51
USHBP1-210ENST00000600286 USP20Q9Y2K6 914 aa18.25■□□□□ 0.51
USHBP1-210ENST00000600286 SCN5AQ14524 2016 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 PSMA7O14818 248 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 GARTP22102 1010 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 MCL1Q07820 350 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 NFKBIBQ15653 356 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 UBXN11Q5T124 520 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 RASIP1Q5U651 963 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 EEF1DP3Q658K8 133 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 CAVIN1Q6NZI2 390 aaKnown RBP18.24■□□□□ 0.51
USHBP1-210ENST00000600286 ARMCX5Q6P1M9 558 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 GLB1LQ6UWU2 654 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 MRPL10Q7Z7H8 261 aaKnown RBP18.24■□□□□ 0.51
USHBP1-210ENST00000600286 KIAA0895Q8NCT3 520 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 LINC01599Q8WXQ3 324 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 YME1L1Q96TA2 773 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 TSG101Q99816 390 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 EIF2AQ9BY44 585 aaKnown RBP18.24■□□□□ 0.51
USHBP1-210ENST00000600286 FGFBP2Q9BYJ0 223 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 PTPRHQ9HD43 1115 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 TOPORSQ9NS56 1045 aaPredicted RBP18.24■□□□□ 0.51
USHBP1-210ENST00000600286 DACH1Q9UI36 760 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 STXBP5LQ9Y2K9 1186 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 GDAQ9Y2T3 454 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 IPPQ9Y573 584 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 INSL6Q9Y581 213 aa18.24■□□□□ 0.51
USHBP1-210ENST00000600286 TTLL13PA6NNM8 815 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 PDXKO00764 312 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 OGTO15294 1046 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 PROZP22891 400 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 DEFB103AP81534 67 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 KCNA1Q09470 495 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 MORC3Q14149 939 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 COBLL1Q53SF7 1204 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 FAM117BQ6P1L5 589 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 HERC6Q8IVU3 1022 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 THNSL1Q8IYQ7 743 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 GLIS3Q8NEA6 775 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 URGCPQ8TCY9 931 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 ZBTB45Q96K62 511 aaPredicted RBP18.23■□□□□ 0.51
USHBP1-210ENST00000600286 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 ACAP3Q96P50 834 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 RAD9AQ99638 391 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 APOL6Q9BWW8 343 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 CDT1Q9H211 546 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 KIAA1586Q9HCI6 787 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 TYW1Q9NV66 732 aaKnown RBP18.23■□□□□ 0.51
USHBP1-210ENST00000600286 MSRAQ9UJ68 235 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 AGO2Q9UKV8 859 aaKnown RBP18.23■□□□□ 0.51
USHBP1-210ENST00000600286 MAPK8IP1Q9UQF2 711 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 GIT1Q9Y2X7 761 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 STYXL1Q9Y6J8 313 aa18.23■□□□□ 0.51
USHBP1-210ENST00000600286 VCANP13611 3396 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 A0A0B4J269 797 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 ANKRD63C9JTQ0 380 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 TLL1O43897 1013 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 GJB5O95377 273 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 EDN1P05305 212 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 CLTAP09496 248 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 RPL13P26373 211 aaKnown RBP18.22■□□□□ 0.51
USHBP1-210ENST00000600286 GRM5P41594 1212 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 MLKLQ8NB16 471 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 NOC3LQ8WTT2 800 aaKnown RBP18.22■□□□□ 0.51
USHBP1-210ENST00000600286 DHTKD1Q96HY7 919 aaPredicted RBP18.22■□□□□ 0.51
USHBP1-210ENST00000600286 RPS6KC1Q96S38 1066 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 RSAD1Q9HA92 442 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 KANSL3Q9P2N6 904 aa18.22■□□□□ 0.51
USHBP1-210ENST00000600286 GBF1Q92538 1859 aa18.21■□□□□ 0.51
USHBP1-210ENST00000600286 PRCPP42785 496 aa18.21■□□□□ 0.51
USHBP1-210ENST00000600286 RAB30Q15771 203 aa18.21■□□□□ 0.51
USHBP1-210ENST00000600286 SMYD4Q8IYR2 804 aaPredicted RBP18.21■□□□□ 0.51
USHBP1-210ENST00000600286 SMG8Q8ND04 991 aaKnown RBP18.21■□□□□ 0.51
USHBP1-210ENST00000600286 TET1Q8NFU7 2136 aa18.21■□□□□ 0.51
USHBP1-210ENST00000600286 MRPL9Q9BYD2 267 aaKnown RBP18.21■□□□□ 0.51
USHBP1-210ENST00000600286 TMEM117Q9H0C3 514 aa18.21■□□□□ 0.51
USHBP1-210ENST00000600286 RPF1Q9H9Y2 349 aaKnown RBP18.21■□□□□ 0.51
USHBP1-210ENST00000600286 AGPAT3Q9NRZ7 376 aa18.21■□□□□ 0.51
USHBP1-210ENST00000600286 SNTG2Q9NY99 539 aa18.21■□□□□ 0.51
USHBP1-210ENST00000600286 CHD9Q3L8U1 2897 aa18.21■□□□□ 0.51
USHBP1-210ENST00000600286 BICDL2A1A5D9 508 aa18.2■□□□□ 0.5
USHBP1-210ENST00000600286 TULP1O00294 542 aaPredicted RBP18.2■□□□□ 0.5
USHBP1-210ENST00000600286 NLRP12P59046 1061 aa18.2■□□□□ 0.5
USHBP1-210ENST00000600286 OSTNP61366 133 aa18.2■□□□□ 0.5
USHBP1-210ENST00000600286 SMAD3P84022 425 aaKnown RBP18.2■□□□□ 0.5
USHBP1-210ENST00000600286 RNASELQ05823 741 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms