RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 TMEM132AQ24JP5 1023 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 HAUS3Q68CZ6 603 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 ASTLQ6HA08 431 aaPredicted RBP19.34■□□□□ 0.69
HOMER3-210ENST00000599097 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 NECAB1Q8N987 351 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 NXPE3Q969Y0 559 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 CPB2Q96IY4 423 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 APOL6Q9BWW8 343 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 RXFP1Q9HBX9 757 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 PPP4R2Q9NY27 417 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 CDH22Q9UJ99 828 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 STK24Q9Y6E0 443 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 WDFY4Q6ZS81 3184 aa19.34■□□□□ 0.69
HOMER3-210ENST00000599097 DENND4AQ7Z401 1863 aa19.33■□□□□ 0.69
HOMER3-210ENST00000599097 A0A1B0GUA9 196 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 FAM205CA6NFA0 338 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 N4BP3O15049 544 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 ZBTB39O15060 712 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 B4GALT3O60512 393 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 GLRA2P23416 452 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 CLCN5P51795 746 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 GNL2Q13823 731 aaKnown RBP19.33■□□□□ 0.68
HOMER3-210ENST00000599097 PDXDC1Q6P996 788 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 ASAP3Q8TDY4 903 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 MTMR9Q96QG7 549 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 MARCH5Q9NX47 278 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 ZDHHC7Q9NXF8 308 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 FNIP2Q9P278 1114 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 PARP2Q9UGN5 583 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 ADAM28Q9UKQ2 775 aa19.33■□□□□ 0.68
HOMER3-210ENST00000599097 TEX28O15482 410 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 NPTXRO95502 500 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 ASGR2P07307 311 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 ATP2B1P20020 1258 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 ELAVL2Q12926 359 aaKnown RBP19.32■□□□□ 0.68
HOMER3-210ENST00000599097 AMHR2Q16671 573 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 FAM187BQ17R55 369 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 FUT10Q6P4F1 479 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 RNF168Q8IYW5 571 aaPredicted RBP19.32■□□□□ 0.68
HOMER3-210ENST00000599097 PIGOQ8TEQ8 1089 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 ZFP42Q96MM3 310 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 LLPHQ9BRT6 129 aaKnown RBP19.32■□□□□ 0.68
HOMER3-210ENST00000599097 POLR3CQ9BUI4 534 aaPredicted RBP19.32■□□□□ 0.68
HOMER3-210ENST00000599097 NXF3Q9H4D5 531 aaKnown RBP19.32■□□□□ 0.68
HOMER3-210ENST00000599097 PIDD1Q9HB75 910 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 FBXL21Q9UKT6 434 aa19.32■□□□□ 0.68
HOMER3-210ENST00000599097 TDRD15B5MCY1 1934 aaKnown RBP19.31■□□□□ 0.68
HOMER3-210ENST00000599097 CLUHO75153 1309 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 CCDC195A0A1B0GUA6 201 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 ARHGEF35A5YM69 484 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 POTEMA6NI47 508 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 MCM7P33993 719 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 AFF1P51825 1210 aaKnown RBP19.31■□□□□ 0.68
HOMER3-210ENST00000599097 MAPK6Q16659 721 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 KIAA0319Q5VV43 1072 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 CDCA2Q69YH5 1023 aaPredicted RBP19.31■□□□□ 0.68
HOMER3-210ENST00000599097 SMG7Q92540 1137 aaKnown RBP19.31■□□□□ 0.68
HOMER3-210ENST00000599097 C8orf76Q96K31 380 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 RTP3Q9BQQ7 232 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 RAB34Q9BZG1 259 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 WDR6Q9NNW5 1121 aaKnown RBP19.31■□□□□ 0.68
HOMER3-210ENST00000599097 CHST7Q9NS84 486 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.31■□□□□ 0.688e-6■■□□□ 11.6
HOMER3-210ENST00000599097 DUSP12Q9UNI6 340 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 HES2Q9Y543 173 aa19.31■□□□□ 0.68
HOMER3-210ENST00000599097 PHLPP2Q6ZVD8 1323 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 TADA2AO75478 443 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 OR52Z1P0C646 297 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 RFX1P22670 979 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 GBP2P32456 591 aaPredicted RBP19.3■□□□□ 0.68
HOMER3-210ENST00000599097 EFNA5P52803 228 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 HMGN5P82970 282 aaKnown RBP19.3■□□□□ 0.68
HOMER3-210ENST00000599097 TUSC3Q13454 348 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 HSP90AA2PQ14568 343 aaPredicted RBP19.3■□□□□ 0.68
HOMER3-210ENST00000599097 DEPTORQ8TB45 409 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 IFT74Q96LB3 600 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
HOMER3-210ENST00000599097 FOXP1Q9H334 677 aaPredicted RBP19.3■□□□□ 0.68
HOMER3-210ENST00000599097 NOL7Q9UMY1 257 aaKnown RBP19.3■□□□□ 0.68
HOMER3-210ENST00000599097 ZFP37Q9Y6Q3 630 aaPredicted RBP19.3■□□□□ 0.68
HOMER3-210ENST00000599097 RPA1P27694 616 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 NAMPTP43490 491 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 TRAPPC10P48553 1259 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 PRPF4BQ13523 1007 aaKnown RBP19.29■□□□□ 0.68
HOMER3-210ENST00000599097 DCAF4L1Q3SXM0 396 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 CATSPER3Q86XQ3 398 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 KCNK12Q9HB15 430 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 EPS15L1Q9UBC2 864 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 LIMCH1Q9UPQ0 1083 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 MYO10Q9HD67 2058 aa19.29■□□□□ 0.68
HOMER3-210ENST00000599097 B4GALT5O43286 388 aa19.28■□□□□ 0.68
HOMER3-210ENST00000599097 GFRA3O60609 400 aa19.28■□□□□ 0.68
HOMER3-210ENST00000599097 JAK2O60674 1132 aa19.28■□□□□ 0.68
HOMER3-210ENST00000599097 LARGE1O95461 756 aa19.28■□□□□ 0.68
HOMER3-210ENST00000599097 EFEMP2O95967 443 aa19.28■□□□□ 0.68
HOMER3-210ENST00000599097 PDGFBP01127 241 aaPredicted RBP19.28■□□□□ 0.68
HOMER3-210ENST00000599097 THP07101 528 aa19.28■□□□□ 0.68
HOMER3-210ENST00000599097 AKAP5P24588 427 aa19.28■□□□□ 0.68
HOMER3-210ENST00000599097 RBM25P49756 843 aaKnown RBP19.28■□□□□ 0.68
HOMER3-210ENST00000599097 FOSBP53539 338 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms