RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
SHKBP1-213ENST00000597325 IFT74Q96LB3 600 aa13.27□□□□□ -0.29
SHKBP1-213ENST00000597325 MAP7D2Q96T17 732 aa13.27□□□□□ -0.29
SHKBP1-213ENST00000597325 IGFLR1Q9H665 355 aa13.27□□□□□ -0.29
SHKBP1-213ENST00000597325 XPNPEP1Q9NQW7 623 aa13.27□□□□□ -0.29
SHKBP1-213ENST00000597325 SETD4Q9NVD3 440 aa13.27□□□□□ -0.29
SHKBP1-213ENST00000597325 FRYQ5TBA9 3013 aa13.27□□□□□ -0.29
SHKBP1-213ENST00000597325 AMHP03971 560 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 PLS3P13797 630 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 KLRC1P26715 233 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 FASNP49327 2511 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 ZNF131P52739 623 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 ZNF445P59923 1031 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 MAPK7Q13164 816 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 STIM1Q13586 685 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 CAMK1Q14012 370 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 MORC3Q14149 939 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 TRIM71Q2Q1W2 868 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 OTOGLQ3ZCN5 2332 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 ZNF658Q5TYW1 1059 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 IER5Q5VY09 327 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 EFCAB12Q6NXP0 572 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 MTHFD1LQ6UB35 978 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 SETXQ7Z333 2677 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 KIAA2013Q8IYS2 634 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 LRRC71Q8N4P6 559 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 TMEM143Q96AN5 459 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 TSPY26PQ9H489 355 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 MRPL44Q9H9J2 332 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 C17orf75Q9HAS0 396 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 HDAC6Q9UBN7 1215 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 KCNG1Q9UIX4 513 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 USP15Q9Y4E8 981 aaPredicted RBP13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 PCDHGC5Q9Y5F6 944 aa13.26□□□□□ -0.29
SHKBP1-213ENST00000597325 IGKV6-21A0A0C4DH24 114 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 CCDC169A6NNP5 214 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 H0YCG3 227 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 K7ENM7 598 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 KIF20AO95235 890 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 RB1P06400 928 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 PPP1R2P41236 205 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 NDUFV1P49821 464 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 CLCN3P51790 818 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 SMTNP53814 917 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 TFDP1Q14186 410 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 L1TD1Q5T7N2 865 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 LRSAM1Q6UWE0 723 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 DAW1Q8N136 415 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 MLKLQ8NB16 471 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 RPGRIP1Q96KN7 1286 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 YME1L1Q96TA2 773 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 NAT10Q9H0A0 1025 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 POLD4Q9HCU8 107 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 SLC39A2Q9NP94 309 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 OLFML3Q9NRN5 406 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 TBC1D7Q9P0N9 293 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 GTF2IRD1Q9UHL9 959 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 AKT3Q9Y243 479 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 FAM208BQ5VWN6 2430 aa13.25□□□□□ -0.29
SHKBP1-213ENST00000597325 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 SFI1A8K8P3 1242 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 GCNT3O95395 438 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 GLP2RO95838 553 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 ABCD1P33897 745 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 PEX3P56589 373 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 EHHADHQ08426 723 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 ALCAMQ13740 583 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 ZNF618Q5T7W0 954 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 DBF4BQ8NFT6 615 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 DEPTORQ8TB45 409 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 SUSD6Q92537 303 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 WNT8BQ93098 351 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 HPS3Q969F9 1004 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 KMT5AQ9NQR1 393 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 RALYQ9UKM9 306 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 GDAQ9Y2T3 454 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 PCDHA2Q9Y5H9 948 aa13.24□□□□□ -0.29
SHKBP1-213ENST00000597325 UBE4BO95155 1302 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 SMIM35A0A1B0GVV1 85 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 LRRIQ4A6NIV6 560 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 PSMA7O14818 248 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 ASAP2O43150 1006 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 CAVIN2O95810 425 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 RPLP2P05387 115 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 ATF7P17544 494 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 SCP2P22307 547 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 HOXC8P31273 242 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 CTNNB1P35222 781 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 ARL2P36404 184 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 BMPR1AP36894 532 aa13.23□□□□□ -0.29
SHKBP1-213ENST00000597325 NAMPTP43490 491 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms