RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TMEM175Q9BSA9 504 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 VN1R3Q9BXE9 311 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 TMEM134Q9H6X4 195 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 ENTPD7Q9NQZ7 604 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 MORC2Q9Y6X9 1032 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 BDP1A6H8Y1 2624 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 NRP1O14786 923 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 KCNC3Q14003 757 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 SLC39A14Q15043 492 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 DUSP6Q16828 381 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 PTCRAQ6ISU1 281 aaPredicted RBP20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 DDX53Q86TM3 631 aaKnown RBP20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 MRPL43Q8N983 215 aaKnown RBP20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 VN1R2Q8NFZ6 395 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 SPIRE2Q8WWL2 714 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 FAM193BQ96PV7 902 aaPredicted RBP20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 KMT5AQ9NQR1 393 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 KLK14Q9P0G3 267 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 CLEC1BQ9P126 229 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 PARP2Q9UGN5 583 aa20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 RBM19Q9Y4C8 960 aaKnown RBP20.36■□□□□ 0.85
SHKBP1-202ENST00000593764 C2orf71A6NGG8 1288 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 SLC16A4O15374 487 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 PLS3P13797 630 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 IL9P15248 144 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 RBM10P98175 930 aaKnown RBP20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 MCM6Q14566 821 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 TMEM132AQ24JP5 1023 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 ATF7IP2Q5U623 682 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 VPS52Q8N1B4 723 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 RAD54LQ92698 747 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 MSLNLQ96KJ4 702 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 CDCA3Q99618 268 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 ACO2Q99798 780 aaKnown RBP20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 ZBP1Q9H171 429 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 CXCL16Q9H2A7 254 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 PTPRHQ9HD43 1115 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 SNTG2Q9NY99 539 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 TNFSF13BQ9Y275 285 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 FAN1Q9Y2M0 1017 aa20.35■□□□□ 0.85
SHKBP1-202ENST00000593764 ZMYM2Q9UBW7 1377 aa20.34■□□□□ 0.85
SHKBP1-202ENST00000593764 PHLPP2Q6ZVD8 1323 aa20.34■□□□□ 0.85
SHKBP1-202ENST00000593764 NASPP49321 788 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-202ENST00000593764 CACNB1Q02641 598 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-202ENST00000593764 PUS10Q3MIT2 529 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-202ENST00000593764 TMEM161BQ8NDZ6 487 aa20.34■□□□□ 0.85
SHKBP1-202ENST00000593764 ADPGKQ9BRR6 497 aa20.34■□□□□ 0.85
SHKBP1-202ENST00000593764 TNFRSF10AO00220 468 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 CXCL14O95715 111 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 EFEMP2O95967 443 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 CTSAP10619 480 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 DDIT3P35638 169 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 NDUFV1P49821 464 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 DHX8Q14562 1220 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 SMC1AQ14683 1233 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 CLUL1Q15846 466 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 GPBP1Q86WP2 473 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 AUTS2Q8WXX7 1259 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 REEP2Q9BRK0 252 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 TARS2Q9BW92 718 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 MARCH5Q9NX47 278 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 BARX2Q9UMQ3 279 aaPredicted RBP20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 IRAK3Q9Y616 596 aa20.33■□□□□ 0.85
SHKBP1-202ENST00000593764 MYH11P35749 1972 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 F8W810 466 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 ABLIM1O14639 778 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 PTGESO14684 152 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 RECQL4O94761 1208 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 MAPTP10636 758 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 OR1G1P47890 313 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 GRIK3Q13003 919 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 GIT2Q14161 759 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 DCAF4L1Q3SXM0 396 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 TMEM184AQ6ZMB5 413 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 FAM178BQ8IXR5 827 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 SPRYD3Q8NCJ5 442 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 LINC00301Q8NCQ3 95 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 LARP4BQ92615 738 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 MRPL4Q9BYD3 311 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 TFIP11Q9UBB9 837 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 DAXXQ9UER7 740 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 KCNG1Q9UIX4 513 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 CD207Q9UJ71 328 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 ODF2LQ9ULJ1 636 aa20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 PRG3Q9Y2Y8 225 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-202ENST00000593764 TDRD15B5MCY1 1934 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 MBTPS2O43462 519 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 ZSCAN22P10073 491 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 PDIA4P13667 645 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 PROZP22891 400 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 ZNF131P52739 623 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 SMTNP53814 917 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 COASYQ13057 564 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 PKP1Q13835 747 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 FOXD4L5Q5VV16 416 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 KRI1Q8N9T8 703 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 SMRP1Q8NCR6 262 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 RASSF8Q8NHQ8 419 aa20.31■□□□□ 0.84
SHKBP1-202ENST00000593764 FOXD4L4Q8WXT5 416 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms