RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TCF20Q9UGU0 1960 aaKnown RBP11.07□□□□□ -0.64
BRCA1-227ENST00000591849 ARL5CA6NH57 179 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 K7ENM7 598 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 TNFRSF10AO00220 468 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 NCK2O43639 380 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 TRAK2O60296 914 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 BRD1O95696 1058 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 LINC00271P0C7V0 271 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 HARSP12081 509 aaKnown RBP11.06□□□□□ -0.64
BRCA1-227ENST00000591849 IDEP14735 1019 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 MLH1P40692 756 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 OR1G1P47890 313 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 SCNN1GP51170 649 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 KRT85P78386 507 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 MRPS5P82675 430 aaKnown RBP11.06□□□□□ -0.64
BRCA1-227ENST00000591849 AMPD3Q01432 767 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 GIT2Q14161 759 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 ZNF568Q3ZCX4 644 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 TPRNQ4KMQ1 711 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 NT5DC1Q5TFE4 455 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 PDE12Q6L8Q7 609 aaKnown RBP11.06□□□□□ -0.64
BRCA1-227ENST00000591849 TMC7Q7Z402 723 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 HAUS6Q7Z4H7 955 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 MRPS27Q92552 414 aaKnown RBP11.06□□□□□ -0.64
BRCA1-227ENST00000591849 SPATA32Q96LK8 384 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
BRCA1-227ENST00000591849 NTPCRQ9BSD7 190 aaKnown RBP11.06□□□□□ -0.64
BRCA1-227ENST00000591849 CCDC94Q9BW85 323 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-227ENST00000591849 TARS2Q9BW92 718 aaKnown RBP11.06□□□□□ -0.64
BRCA1-227ENST00000591849 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 TLE6Q9H808 572 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 TLR9Q9NR96 1032 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 SNTG2Q9NY99 539 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 ARHGAP28Q9P2N2 729 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 TNFSF13BQ9Y275 285 aa11.06□□□□□ -0.64
BRCA1-227ENST00000591849 XIRP2A4UGR9 3374 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-227ENST00000591849 GALTP07902 379 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 SCP2P22307 547 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 ABCD1P33897 745 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 LIG4P49917 911 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 OSTNP61366 133 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 NUCB2P80303 420 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 PLCB3Q01970 1234 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 PLPP4Q5VZY2 271 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 EEF1DP3Q658K8 133 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 RBM23Q86U06 439 aaKnown RBP11.05□□□□□ -0.64
BRCA1-227ENST00000591849 ZNF280BQ86YH2 543 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 FAM178BQ8IXR5 827 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 SLC39A11Q8N1S5 342 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 IQUBQ8NA54 791 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 TMEM161BQ8NDZ6 487 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 DDX12PQ92771 950 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 DHX58Q96C10 678 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 TCF25Q9BQ70 676 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 TMEM175Q9BSA9 504 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 COLEC11Q9BWP8 271 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 NGRNQ9NPE2 291 aaKnown RBP11.05□□□□□ -0.64
BRCA1-227ENST00000591849 ANKFY1Q9P2R3 1169 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 PCDHA7Q9UN72 937 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 LZTS1Q9Y250 596 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 PRG3Q9Y2Y8 225 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-227ENST00000591849 LOXHD1Q8IVV2 1947 aa11.05□□□□□ -0.64
BRCA1-227ENST00000591849 MYMKA6NI61 221 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 CLDN3O15551 220 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 DDHD2O94830 711 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 CXCL14O95715 111 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 MAPTP10636 758 aaKnown RBP11.04□□□□□ -0.64
BRCA1-227ENST00000591849 MCF2P10911 925 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 GAP43P17677 238 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 DNAJB1P25685 340 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 IRS1P35568 1242 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 NRIP1P48552 1158 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 SLC11A1P49279 550 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 HERC4Q5GLZ8 1057 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-227ENST00000591849 MPZL3Q6UWV2 235 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 CCDC65Q8IXS2 484 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 CEP57L1Q8IYX8 460 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 LRRC15Q8TF66 581 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 IGSF21Q96ID5 467 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 ZFP42Q96MM3 310 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 ASB2Q96Q27 587 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 PYM1Q9BRP8 204 aaKnown RBP11.04□□□□□ -0.64
BRCA1-227ENST00000591849 CUEDC2Q9H467 287 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 TOPORSQ9NS56 1045 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-227ENST00000591849 MIOSQ9NXC5 875 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 CLDND1Q9NY35 253 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 DNAJB4Q9UDY4 337 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 STK39Q9UEW8 545 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 RCOR1Q9UKL0 485 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 COL4A6Q14031 1691 aa11.04□□□□□ -0.64
BRCA1-227ENST00000591849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 NRP1O14786 923 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 HNRNPDLO14979 420 aaKnown RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 POLR2DO15514 142 aaKnown RBP11.03□□□□□ -0.64
BRCA1-227ENST00000591849 TOM1L1O75674 476 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 RECQL4O94761 1208 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 EDN1P05305 212 aa11.03□□□□□ -0.64
BRCA1-227ENST00000591849 THP07101 528 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms