RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 EXOC3L4Q17RC7 722 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 METTL13Q8N6R0 699 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 Q9Y3F1 56 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 SOWAHDA6NJG2 315 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 PIGRP01833 764 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 TFDP1Q14186 410 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 SNRNP35Q16560 246 aaKnown RBP21.11■□□□□ 0.97
SPHK1-207ENST00000590959 LHX8Q68G74 356 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 GBP6Q6ZN66 633 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 CACNA2D4Q7Z3S7 1137 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 ZBTB8OSQ8IWT0 167 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 RNF149Q8NC42 400 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 CEP72Q9P209 647 aa21.11■□□□□ 0.97
SPHK1-207ENST00000590959 DDX20Q9UHI6 824 aaKnown RBP21.11■□□□□ 0.97
SPHK1-207ENST00000590959 ASAP2O43150 1006 aa21.1■□□□□ 0.97
SPHK1-207ENST00000590959 SRGAP2CP0DJJ0 459 aa21.1■□□□□ 0.97
SPHK1-207ENST00000590959 KLRC1P26715 233 aa21.1■□□□□ 0.97
SPHK1-207ENST00000590959 VAMP7P51809 220 aa21.1■□□□□ 0.97
SPHK1-207ENST00000590959 CDCA2Q69YH5 1023 aaPredicted RBP21.1■□□□□ 0.97
SPHK1-207ENST00000590959 RAD9BQ6WBX8 426 aa21.1■□□□□ 0.97
SPHK1-207ENST00000590959 RHPN2Q8IUC4 686 aa21.1■□□□□ 0.97
SPHK1-207ENST00000590959 FBXL18Q96ME1 805 aa21.1■□□□□ 0.97
SPHK1-207ENST00000590959 C2orf40Q9H1Z8 148 aa21.1■□□□□ 0.97
SPHK1-207ENST00000590959 GOLGA8IPA6NC78 632 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 GOLGA8JA6NMD2 632 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 KIAA0391O15091 583 aaKnown RBP21.09■□□□□ 0.97
SPHK1-207ENST00000590959 RARBP10826 455 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 FMO5P49326 533 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 CLCN3P51790 818 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 MEA1Q16626 185 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 SLFN12LQ6IEE8 588 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 SAAL1Q96ER3 474 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 DESI2Q9BSY9 194 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 FUT8Q9BYC5 575 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 AP5M1Q9H0R1 490 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 PLCB1Q9NQ66 1216 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 STYXL1Q9Y6J8 313 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 MAP2K7O14733 419 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 NOL4O94818 638 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 TRIM49P0CI25 452 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 TRIM49CP0CI26 452 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 OAS2P29728 719 aaKnown RBP21.09■□□□□ 0.97
SPHK1-207ENST00000590959 CPT1AP50416 773 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 PPFIA1Q13136 1202 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 PKN2Q16513 984 aaKnown RBP21.09■□□□□ 0.97
SPHK1-207ENST00000590959 HDXQ7Z353 690 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 GPD1LQ8N335 351 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 ZSWIM2Q8NEG5 633 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 EXOC4Q96A65 974 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 NAPGQ99747 312 aaPredicted RBP21.09■□□□□ 0.97
SPHK1-207ENST00000590959 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.09■□□□□ 0.973e-6■■□□□ 13.4
SPHK1-207ENST00000590959 TSPYL1Q9H0U9 437 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 NUCKS1Q9H1E3 243 aaKnown RBP21.09■□□□□ 0.97
SPHK1-207ENST00000590959 XPNPEP3Q9NQH7 507 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 PLAGL2Q9UPG8 496 aa21.09■□□□□ 0.97
SPHK1-207ENST00000590959 ADAMTS4O75173 837 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 C6orf222P0C671 652 aaPredicted RBP21.08■□□□□ 0.97
SPHK1-207ENST00000590959 SLC9A1P19634 815 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 MCM3P25205 808 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 PON1P27169 355 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 TMOD1P28289 359 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 HNRNPH3P31942 346 aaKnown RBP21.08■□□□□ 0.97
SPHK1-207ENST00000590959 GJA9P57773 515 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 LONRF2Q1L5Z9 754 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 WDR59Q6PJI9 974 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 RRAGAQ7L523 313 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 USP37Q86T82 979 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 CBWD2Q8IUF1 395 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 BAP1Q92560 729 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 ACBD3Q9H3P7 528 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 KIAA1586Q9HCI6 787 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 ST7Q9NRC1 585 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 GCNT4Q9P109 453 aa21.08■□□□□ 0.97
SPHK1-207ENST00000590959 N4BP1O75113 896 aaKnown RBP21.07■□□□□ 0.96
SPHK1-207ENST00000590959 F2P00734 622 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 MCCD1P59942 119 aaPredicted RBP21.07■□□□□ 0.96
SPHK1-207ENST00000590959 POLR2FP61218 127 aaKnown RBP21.07■□□□□ 0.96
SPHK1-207ENST00000590959 MTF1Q14872 753 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 GRIK4Q16099 956 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 MAPK6Q16659 721 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 ZPBP2Q6X784 338 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 ZNF662Q6ZS27 426 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 ZBTB10Q96DT7 871 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 ZNF333Q96JL9 665 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 NLRP4Q96MN2 994 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 TARS2Q9BW92 718 aaKnown RBP21.07■□□□□ 0.96
SPHK1-207ENST00000590959 CCDC113Q9H0I3 377 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 LRRC53A6NM62 1247 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 SEC31AO94979 1220 aaKnown RBP21.07■□□□□ 0.96
SPHK1-207ENST00000590959 MYCNP04198 464 aaPredicted RBP21.07■□□□□ 0.96
SPHK1-207ENST00000590959 ADRB2P07550 413 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 CCL5P13501 91 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 CDK17Q00537 523 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 FSCN1Q16658 493 aaKnown RBP21.07■□□□□ 0.96
SPHK1-207ENST00000590959 CBWD6Q4V339 395 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 CBWD3Q5JTY5 395 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 ZNF569Q5MCW4 686 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 CBWD5Q5RIA9 395 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 MTHFD1LQ6UB35 978 aa21.07■□□□□ 0.96
SPHK1-207ENST00000590959 LINC01465Q8N7H1 131 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms