RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, human

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCDH-213	ENST00000590627	PHLPP2	Q6ZVD8	1323 aa		18.21	■□□□□ 0.51
GCDH-213	ENST00000590627	ADGRA3	Q8IWK6	1321 aa		18.21	■□□□□ 0.51
GCDH-213	ENST00000590627	LRRIQ4	A6NIV6	560 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	C5orf67	F2Z3F1	127 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627		K7ENM7	598 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	GCNT3	O95395	438 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	VTN	P04004	478 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	SRGAP2C	P0DJJ0	459 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	PTEN	P60484	403 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	STIM1	Q13586	685 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	LPIN1	Q14693	890 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	COL19A1	Q14993	1142 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	GJD3	Q8N144	294 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	FAM122A	Q96E09	287 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	LMAN2L	Q9H0V9	348 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	NSUN3	Q9H649	340 aa	Known RBP	18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	RC3H2	Q9HBD1	1191 aa	Known RBP	18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	IFT122	Q9HBG6	1241 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	CD320	Q9NPF0	282 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	SQOR	Q9Y6N5	450 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	EVPL	Q92817	2033 aa		18.2	■□□□□ 0.5
GCDH-213	ENST00000590627	MYH11	P35749	1972 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	GRXCR2	A6NFK2	248 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	ERCC5	P28715	1186 aa	Predicted RBP	18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	PHKA2	P46019	1235 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	TTC3	P53804	2025 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	NLRP11	P59045	1033 aa	Known RBP	18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	ANO6	Q4KMQ2	910 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	FBXO47	Q5MNV8	452 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	L1TD1	Q5T7N2	865 aa	Known RBP	18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	FOXR2	Q6PJQ5	311 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	TSHZ1	Q6ZSZ6	1077 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	ZBTB8OS	Q8IWT0	167 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	NLRP4	Q96MN2	994 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	KIFC3	Q9BVG8	833 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	TSPY26P	Q9H489	355 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	TBX20	Q9UMR3	447 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627	HCN4	Q9Y3Q4	1203 aa		18.19	■□□□□ 0.5
GCDH-213	ENST00000590627		A0A087WZ62	844 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	DENND3	A2RUS2	1198 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	ENPP3	O14638	875 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	PSMA7	O14818	248 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	NCK2	O43639	380 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	PRPF6	O94906	941 aa	Known RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	LINC00271	P0C7V0	271 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	IL9	P15248	144 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	CTNNB1	P35222	781 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	HOXD13	P35453	343 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	BMPR1A	P36894	532 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	MRPS6	P82932	125 aa	Known RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	KNOP1	Q1ED39	458 aa	Known RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	TCEAL5	Q5H9L2	206 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	CENPP	Q6IPU0	288 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	TAS1R3	Q7RTX0	852 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	SRGAP1	Q7Z6B7	1085 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	CLP1	Q92989	425 aa	Known RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	ZNF689	Q96CS4	500 aa	Predicted RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	ACCS	Q96QU6	501 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	BPIFA3	Q9BQP9	254 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	FDXACB1	Q9BRP7	624 aa	Predicted RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	C11orf84	Q9BUA3	381 aa	Predicted RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	NAT10	Q9H0A0	1025 aa	Known RBP	18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	CCDC113	Q9H0I3	377 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	DNAJC25	Q9H1X3	360 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	FZD8	Q9H461	694 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	TMEM206	Q9H813	350 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	C11orf16	Q9NQ32	467 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	MAPK8IP1	Q9UQF2	711 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	FAM50B	Q9Y247	325 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	CDY2A	Q9Y6F7	541 aa		18.18	■□□□□ 0.5
GCDH-213	ENST00000590627	MYO7A	Q13402	2215 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627		K7ERI5	159 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	CRYBB1	P53674	252 aa	Predicted RBP	18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.17	■□□□□ 0.5	2e-6	■■■■■ 36.4
GCDH-213	ENST00000590627	FAM187B	Q17R55	369 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	KIZ	Q2M2Z5	673 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	MAP4K3	Q8IVH8	894 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	NLRP7	Q8WX94	980 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	FTHL17	Q9BXU8	183 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	CELF4	Q9BZC1	486 aa	Known RBP	18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	GCOM2	Q9BZD3	368 aa	Predicted RBP	18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	KCTD10	Q9H3F6	313 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	RWDD2A	Q9UIY3	292 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627	EXOC7	Q9UPT5	735 aa		18.17	■□□□□ 0.5
GCDH-213	ENST00000590627		H3BQ06	376 aa	Predicted RBP	18.16	■□□□□ 0.5
GCDH-213	ENST00000590627		M0QZ92	97 aa		18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	DARS	P14868	501 aa	Known RBP	18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	CCNE1	P24864	410 aa		18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	SNRPF	P62306	86 aa	Known RBP	18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	MBTD1	Q05BQ5	628 aa		18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	KCNA1	Q09470	495 aa		18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	PAK1	Q13153	545 aa		18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	MAPK6	Q16659	721 aa		18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	ZCWPW2	Q504Y3	356 aa		18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	PPP4R3CP	Q6ZMV5	832 aa		18.16	■□□□□ 0.5
GCDH-213	ENST00000590627	NELFB	Q8WX92	580 aa		18.16	■□□□□ 0.5

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