RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ATF7IP2	Q5U623	682 aa		19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	COLGALT2	Q8IYK4	626 aa		19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	ATXN2L	Q8WWM7	1075 aa	Known RBP	19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	TARS2	Q9BW92	718 aa	Known RBP	19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	PANK2	Q9BZ23	570 aa		19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	SNTG2	Q9NY99	539 aa		19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	KLK14	Q9P0G3	267 aa		19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	STK17A	Q9UEE5	414 aa		19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	ODF2L	Q9ULJ1	636 aa		19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	TNFSF13B	Q9Y275	285 aa		19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	RBM19	Q9Y4C8	960 aa	Known RBP	19.05	■□□□□ 0.64
MBD1-221	ENST00000589867	MEFV	O15553	781 aa	Predicted RBP	19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	E2F4	Q16254	413 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	RRAGB	Q5VZM2	374 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	CEP120	Q8N960	986 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	HLA-C	Q95604	372 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	DNAJC19	Q96DA6	116 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	ZBTB45	Q96K62	511 aa	Predicted RBP	19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	ASB2	Q96Q27	587 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	TRIM6	Q9C030	488 aa	Predicted RBP	19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	HAPLN2	Q9GZV7	340 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	GBP3	Q9H0R5	595 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	CDT1	Q9H211	546 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	UBE2Z	Q9H832	354 aa	Predicted RBP	19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	UBN1	Q9NPG3	1134 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	TLR9	Q9NR96	1032 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	MARCH5	Q9NX47	278 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	DAXX	Q9UER7	740 aa	Predicted RBP	19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	COG5	Q9UP83	839 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	ZMYM2	Q9UBW7	1377 aa		19.04	■□□□□ 0.64
MBD1-221	ENST00000589867	BDP1	A6H8Y1	2624 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867		F8W810	466 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	PTGES	O14684	152 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	LINC01565	O15544	149 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	RECQL4	O94761	1208 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	EFEMP2	O95967	443 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	BMP1	P13497	986 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	PPM1A	P35813	382 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	KCNQ1	P51787	676 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	DLX2	Q07687	328 aa	Predicted RBP	19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	NAB2	Q15742	525 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	RASSF8	Q8NHQ8	419 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	URGCP	Q8TCY9	931 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	IGSF21	Q96ID5	467 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	RCOR1	Q9UKL0	485 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	PCDHA7	Q9UN72	937 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	C5orf42	Q9H799	3197 aa		19.03	■□□□□ 0.64
MBD1-221	ENST00000589867	HIDE1	A8MVS5	230 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	CUTA	O60888	179 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	ALDH7A1	P49419	539 aa	Known RBP	19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	MRPS5	P82675	430 aa	Known RBP	19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	RNASEL	Q05823	741 aa	Known RBP	19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	ATL3	Q6DD88	541 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	VN1R2	Q8NFZ6	395 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	PABPC5	Q96DU9	382 aa	Known RBP	19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	TMEM175	Q9BSA9	504 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	COL25A1	Q9BXS0	654 aa	Predicted RBP	19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	MRPL4	Q9BYD3	311 aa	Known RBP	19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	KANSL3	Q9P2N6	904 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	CACNG4	Q9UBN1	327 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	CCDC39	Q9UFE4	941 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	PARP2	Q9UGN5	583 aa		19.02	■□□□□ 0.64
MBD1-221	ENST00000589867	NRP1	O14786	923 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	GLP2R	O95838	553 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	RBM10	P98175	930 aa	Known RBP	19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	DCAF4L1	Q3SXM0	396 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	HAUS6	Q7Z4H7	955 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	PDILT	Q8N807	584 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	DDX12P	Q92771	950 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	ZBP1	Q9H171	429 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	PARVG	Q9HBI0	331 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	LARS	Q9P2J5	1176 aa	Known RBP	19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	GDA	Q9Y2T3	454 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	CIT	O14578	2027 aa		19.01	■□□□□ 0.63
MBD1-221	ENST00000589867	PER2	O15055	1255 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	TBX10	O75333	385 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	FAM13A	O94988	1023 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	IGFBP6	P24592	240 aa	Predicted RBP	19	■□□□□ 0.63
MBD1-221	ENST00000589867	NMT1	P30419	496 aa	Known RBP	19	■□□□□ 0.63
MBD1-221	ENST00000589867	SMTN	P53814	917 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	ADAM15	Q13444	863 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	KCNC3	Q14003	757 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	TJAP1	Q5JTD0	557 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	PLPP4	Q5VZY2	271 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	SLC39A4	Q6P5W5	647 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	ALKAL1	Q6UXT8	129 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	CCDC73	Q6ZRK6	1079 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	DYM	Q7RTS9	669 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	DDX53	Q86TM3	631 aa	Known RBP	19	■□□□□ 0.63
MBD1-221	ENST00000589867	RBM23	Q86U06	439 aa	Known RBP	19	■□□□□ 0.63
MBD1-221	ENST00000589867	RNF168	Q8IYW5	571 aa	Predicted RBP	19	■□□□□ 0.63
MBD1-221	ENST00000589867	MYCT1	Q8N699	235 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	19	■□□□□ 0.63
MBD1-221	ENST00000589867	KCNG4	Q8TDN1	519 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	TCF25	Q9BQ70	676 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	PAAF1	Q9BRP4	392 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	STRA6	Q9BX79	667 aa		19	■□□□□ 0.63
MBD1-221	ENST00000589867	FRMD3	A2A2Y4	597 aa		18.99	■□□□□ 0.63
MBD1-221	ENST00000589867	C2orf71	A6NGG8	1288 aa		18.99	■□□□□ 0.63
MBD1-221	ENST00000589867	TRAK2	O60296	914 aa		18.99	■□□□□ 0.63

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