RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 TAPT1Q6NXT6 567 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 IRF2BP2Q7Z5L9 587 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 GPD1LQ8N335 351 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 LRRN4CLQ8ND94 238 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 TCP11Q8WWU5 503 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 SECISBP2LQ93073 1101 aaKnown RBP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 CCDC127Q96BQ5 260 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 HHIPL1Q96JK4 782 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 FAM213AQ9BRX8 229 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 CARD6Q9BX69 1037 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 STK33Q9BYT3 514 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 LUC7LQ9NQ29 371 aaKnown RBP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 CPA4Q9UI42 421 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 DAAM1Q9Y4D1 1078 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 MRFAP1Q9Y605 127 aa9.51□□□□□ -0.89
SMAD4-206ENST00000588860 BZW2Q9Y6E2 419 aaKnown RBP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 V9GYY5 206 aaPredicted RBP9.51□□□□□ -0.89
SMAD4-206ENST00000588860 CUL9Q8IWT3 2517 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 TRIP11Q15643 1979 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 RBM47A0AV96 593 aaKnown RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 SLC15A5A6NIM6 579 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 LRRIQ3A6PVS8 624 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 ZBTB42B2RXF5 422 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 F8VZ95 297 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 K7ERI5 159 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 GAS2O43903 313 aaKnown RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 ADCY3O60266 1144 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 PNMA6AP0CW24 399 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 RFX1P22670 979 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 SOX5P35711 763 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 SLC26A2P50443 739 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 RBM10P98175 930 aaKnown RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 PTK2Q05397 1052 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 NCBP1Q09161 790 aaKnown RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 DRP2Q13474 957 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 LAMC2Q13753 1193 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 NAA30Q147X3 362 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 DRAP1Q14919 205 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 SLC18A3Q16572 532 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 ARHGAP44Q17R89 818 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 ZNF571Q7Z3V5 609 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 CTU1Q7Z7A3 348 aaKnown RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 USP37Q86T82 979 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 EXOC8Q8IYI6 725 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 LRRC71Q8N4P6 559 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 TMC2Q8TDI7 906 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 TRAPPC12Q8WVT3 735 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 PSPC1Q8WXF1 523 aaKnown RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 MAML3Q96JK9 1138 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 MFSD14AQ96MC6 490 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 FBXL18Q96ME1 805 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 TMEM117Q9H0C3 514 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 TMEM134Q9H6X4 195 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 SUGCTQ9HAC7 445 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 TOPORSQ9NS56 1045 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-206ENST00000588860 ANKFY1Q9P2R3 1169 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 APEX2Q9UBZ4 518 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 DUSP10Q9Y6W6 482 aa9.5□□□□□ -0.89
SMAD4-206ENST00000588860 A0A087X0T9 212 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 MANSC4A6NHS7 340 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ZNF233A6NK53 670 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 KIAA0391O15091 583 aaKnown RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 PMM2O15305 246 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 PJA2O43164 708 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 EXTL3O43909 919 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 HBP1O60381 514 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 TACC1O75410 805 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 MOCS3O95396 460 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 SNAI1O95863 264 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 PIGRP01833 764 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 LGALS2P05162 132 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 FAM228BP0C875 321 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ZNF286BP0CG31 522 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 SRGAP2CP0DJJ0 459 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ANXA13P27216 316 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 GTF2H1P32780 548 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 PRKCIP41743 596 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 LAMTOR4Q0VGL1 99 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 NOGQ13253 232 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 TUBB2AQ13885 445 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 HSP90AA2PQ14568 343 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 TAF1CQ15572 869 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ELF2Q15723 593 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 SLFN12LQ6IEE8 588 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 MAMDC4Q6UXC1 1216 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 VPS36Q86VN1 386 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 FMNL3Q8IVF7 1028 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ARHGEF19Q8IW93 802 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 ZBTB8OSQ8IWT0 167 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 OR6J1Q8NGC5 347 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 PPTC7Q8NI37 304 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 LMO3Q8TAP4 145 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 PARD3BQ8TEW8 1205 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 AFG1LQ8WV93 481 aa9.49□□□□□ -0.89
SMAD4-206ENST00000588860 PRPF31Q8WWY3 499 aaKnown RBP9.49□□□□□ -0.89
SMAD4-206ENST00000588860 KCNN1Q92952 543 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms