RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 ENPP3O14638 875 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 MAP2K7O14733 419 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 NKRFO15226 690 aaKnown RBP eCLIP4.62□□□□□ -1.67
LIG3-211ENST00000588713 NCAM2O15394 837 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 CAPN5O15484 640 aaPredicted RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 MAFO75444 373 aaPredicted RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 TXNP10599 105 aaKnown RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 GP1BBP13224 206 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 EEF2P13639 858 aaKnown RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 AKR1B1P15121 316 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 EPCAMP16422 314 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 GUCY2CP25092 1073 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 TXLNAP40222 546 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 MPLP40238 635 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 GTF2A1P52655 376 aaPredicted RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 GPC5P78333 572 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 MYL5Q02045 173 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 OS9Q13438 667 aaPredicted RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 DPCR1Q3MIW9 517 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 AXDND1Q5T1B0 1012 aaPredicted RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 ADALQ6DHV7 355 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 FAM173BQ6P4H8 233 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 TRIM65Q6PJ69 517 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 NSMFQ6X4W1 530 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 BRAPQ7Z569 592 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 RETREG3Q86VR2 466 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 VSTM4Q8IW00 320 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 REXO1L1PQ8IX06 675 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 EFCAB13Q8IY85 973 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 LRRC47Q8N1G4 583 aaKnown RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 MIGA1Q8NAN2 632 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 SPATA5Q8NB90 893 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 NSUN7Q8NE18 718 aaKnown RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 FAM71BQ8TC56 605 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 WHAMMQ8TF30 809 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 ATP6V0A1Q93050 837 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 NCAPGQ9BPX3 1015 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 KATNAL1Q9BW62 490 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 CARD6Q9BX69 1037 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 FUT8Q9BYC5 575 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 AGXT2Q9BYV1 514 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 GPCPD1Q9NPB8 672 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 NGRNQ9NPE2 291 aaKnown RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 MED4Q9NPJ6 270 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 SLC2A4RGQ9NR83 387 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 FAM217BQ9NTX9 383 aaPredicted RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 DZANK1Q9NVP4 752 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 RTEL1Q9NZ71 1219 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 IFNKQ9P0W0 207 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 PUF60Q9UHX1 559 aaKnown RBP4.62□□□□□ -1.67
LIG3-211ENST00000588713 RAB21Q9UL25 225 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 LRFN2Q9ULH4 789 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 NUMBLQ9Y6R0 609 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 RELNP78509 3460 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 CFAP46Q8IYW2 2715 aa4.62□□□□□ -1.67
LIG3-211ENST00000588713 ITPR3Q14573 2671 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 FBN2P35556 2912 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 A0A0D9SFI3 127 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 FAM237AA0A1B0GTK4 181 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 TBKBP1A7MCY6 615 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 ATP2A1O14983 1001 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 POLR3GO15318 223 aaPredicted RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 STX10O60499 249 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 JAK2O60674 1132 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 LILRB3O75022 631 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 URI1O94763 535 aaPredicted RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 SEC31AO94979 1220 aaKnown RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 EPN2O95208 641 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 ARIH2O95376 493 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 FDX1P10109 184 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 ALAS1P13196 640 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 ATP2B1P20020 1258 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 POU3F2P20265 443 aaPredicted RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 CSRP1P21291 193 aaKnown RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 RDXP35241 583 aaKnown RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 USP8P40818 1118 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 LMAN1P49257 510 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 CSRP3P50461 194 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 ALDH5A1P51649 535 aaPredicted RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 CORO7P57737 925 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 TIMM10P62072 90 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 FANCCQ00597 558 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 SATB1Q01826 763 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 PRKCQQ04759 706 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 SCRN1Q12765 414 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 NCAPHQ15003 741 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 LONRF2Q1L5Z9 754 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 RABL6Q3YEC7 729 aaPredicted RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 SLC44A4Q53GD3 710 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 TAF1BQ53T94 588 aaPredicted RBP4.61□□□□□ -1.67
LIG3-211ENST00000588713 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 TPRG1Q6ZUI0 275 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 HDXQ7Z353 690 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 PRICKLE2Q7Z3G6 844 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 GPR149Q86SP6 731 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 AACSQ86V21 672 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 SERINC5Q86VE9 423 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 TMEM139Q8IV31 216 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 C10orf67Q8IYJ2 551 aa4.61□□□□□ -1.67
LIG3-211ENST00000588713 FBXL16Q8N461 479 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms