RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 LMBR1Q8WVP7 490 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 TRAPPC12Q8WVT3 735 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 KCNN1Q92952 543 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 FIZ1Q96SL8 496 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 LSM14BQ9BX40 385 aaKnown RBP6.73□□□□□ -1.33
LIG3-206ENST00000586058 STRA6Q9BX79 667 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 GCOM2Q9BZD3 368 aaPredicted RBP6.73□□□□□ -1.33
LIG3-206ENST00000586058 EDEM3Q9BZQ6 932 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 TRIM6Q9C030 488 aaPredicted RBP6.73□□□□□ -1.33
LIG3-206ENST00000586058 FAM49AQ9H0Q0 323 aaPredicted RBP6.73□□□□□ -1.33
LIG3-206ENST00000586058 RNPEPQ9H4A4 650 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 FAM207AQ9NSI2 230 aaPredicted RBP6.73□□□□□ -1.33
LIG3-206ENST00000586058 ABHD10Q9NUJ1 306 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 DDX20Q9UHI6 824 aaKnown RBP6.73□□□□□ -1.33
LIG3-206ENST00000586058 TELO2Q9Y4R8 837 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 MYH10P35580 1976 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 ADGRA3Q8IWK6 1321 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 CNTNAP2Q9UHC6 1331 aa6.73□□□□□ -1.33
LIG3-206ENST00000586058 MOXD2PA6NHM9 499 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 KIF2AO00139 706 aaPredicted RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 EXTL3O43909 919 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 PHACTR2O75167 634 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 GYPCP04921 128 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 CCDC175P0C221 793 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 ELNP15502 786 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 TNNI1P19237 187 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 CST5P28325 142 aaPredicted RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 AXLP30530 894 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 GRK4P32298 578 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 GTF2H1P32780 548 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 PBX1P40424 430 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 KCNJ6P48051 423 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 FMO5P49326 533 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 AP3M2P53677 418 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 YARSP54577 528 aaKnown RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 PURAQ00577 322 aaKnown RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 BEX3Q00994 111 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 CACNB2Q08289 660 aaPredicted RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 RBL2Q08999 1139 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 RAPGEF1Q13905 1077 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 DSG2Q14126 1118 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 DCAF4L1Q3SXM0 396 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 ATF7IP2Q5U623 682 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 KRT39Q6A163 491 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 MPZL3Q6UWV2 235 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 CATSPER4Q7RTX7 472 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 APTXQ7Z2E3 356 aaKnown RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 IRF2BP1Q8IU81 584 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 HACE1Q8IYU2 909 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 NME8Q8N427 588 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 CCDC155Q8N6L0 562 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 ARRDC4Q8NCT1 418 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 OR8K1Q8NGG5 319 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 CACTINQ8WUQ7 758 aaKnown RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 SLC35C1Q96A29 364 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 LENG1Q96BZ8 264 aaPredicted RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 SAAL1Q96ER3 474 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 ANKRD36BP1Q96IX9 119 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 GLT1D1Q96MS3 346 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 CBWD1Q9BRT8 395 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 FAM213AQ9BRX8 229 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 UPF3AQ9H1J1 476 aaKnown RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 C1orf112Q9NSG2 853 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 SETD4Q9NVD3 440 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 INTS13Q9NVM9 706 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 RBAKQ9NYW8 714 aaPredicted RBP6.72□□□□□ -1.33
LIG3-206ENST00000586058 CAPN11Q9UMQ6 739 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 GINS2Q9Y248 185 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 TRIM17Q9Y577 477 aa6.72□□□□□ -1.33
LIG3-206ENST00000586058 A0A087WZ62 844 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 GOLGA8IPA6NC78 632 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 GOLGA8JA6NMD2 632 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 ZBTB42B2RXF5 422 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 ACKR2O00590 384 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 ARHGAP33O14559 1287 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 OGTO15294 1046 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 ADCY6O43306 1168 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 IL18RAPO95256 599 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 TNNC2P02585 160 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 VTNP04004 478 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 INHAP05111 366 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 TMEM191BP0C7N4 346 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 TRIM49P0CI25 452 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 TRIM49CP0CI26 452 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 DLATP10515 647 aaKnown RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 CTGFP29279 349 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 HOXD13P35453 343 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 PIK3CAP42336 1068 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 CASP4P49662 377 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 GPC3P51654 580 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 NLRP11P59045 1033 aaKnown RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 PTENP60484 403 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 POLR2FP61218 127 aaKnown RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 KRT83P78385 493 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 PTPN11Q06124 597 aaPredicted RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 CYP24A1Q07973 514 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 TBX2Q13207 712 aaPredicted RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 BIRC3Q13489 604 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 SPA17Q15506 151 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms