RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 USP20Q9Y2K6 914 aa13.83□□□□□ -0.2
VMP1-202ENST00000585847 A0A1B0GTH6 734 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 CCDC169A6NNP5 214 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 M0QZ92 97 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 CETN3O15182 167 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 RPS6KA5O75582 802 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 GCNT3O95395 438 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 PARNO95453 639 aaKnown RBP13.82□□□□□ -0.2
VMP1-202ENST00000585847 PHKA2P46019 1235 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 EFNA5P52803 228 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 UBASH3AP57075 661 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 GTF2BQ00403 316 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 FPGSQ05932 587 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 TRIM14Q14142 442 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 FAM187BQ17R55 369 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 TCP11X2Q5H9J9 407 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 TMEM240Q5SV17 173 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 TMEM199Q8N511 208 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 MAFAQ8NHW3 353 aaPredicted RBP13.82□□□□□ -0.2
VMP1-202ENST00000585847 ACCSQ96QU6 501 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 CDX2Q99626 313 aaPredicted RBP13.82□□□□□ -0.2
VMP1-202ENST00000585847 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 C2orf40Q9H1Z8 148 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 HSD3B7Q9H2F3 369 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 KCTD10Q9H3F6 313 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 TMEM134Q9H6X4 195 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 KMT5AQ9NQR1 393 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 TBC1D7Q9P0N9 293 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 ST3GAL5Q9UNP4 418 aa13.82□□□□□ -0.2
VMP1-202ENST00000585847 A0A1W2PQC6 194 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 KCNJ18B7U540 433 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 K7ENM7 598 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 MAPK13O15264 365 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 B4GALT5O43286 388 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 TSPAN1O60635 241 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 MYBP10242 640 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 HOXA11P31270 313 aaPredicted RBP13.81□□□□□ -0.2
VMP1-202ENST00000585847 HOXD13P35453 343 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 PPIGQ13427 754 aaKnown RBP eCLIP13.81□□□□□ -0.2
VMP1-202ENST00000585847 KCNJ12Q14500 433 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 PCBP1Q15365 356 aaKnown RBP eCLIP13.81□□□□□ -0.2
VMP1-202ENST00000585847 ZC2HC1CQ53FD0 456 aaPredicted RBP13.81□□□□□ -0.2
VMP1-202ENST00000585847 C9orf50Q5SZB4 431 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 HAUS6Q7Z4H7 955 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 USP37Q86T82 979 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.81□□□□□ -0.2
VMP1-202ENST00000585847 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
VMP1-202ENST00000585847 IKZF4Q9H2S9 585 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 DAAM1Q9Y4D1 1078 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 ITIH6Q6UXX5 1313 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 TTC3P53804 2025 aa13.81□□□□□ -0.2
VMP1-202ENST00000585847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.8□□□□□ -0.2
VMP1-202ENST00000585847 DENND3A2RUS2 1198 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 INO80B-WBP1J3KQ70 363 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 ABLIM1O14639 778 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 PRKCBP05771 671 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
VMP1-202ENST00000585847 TPM1P09493 284 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 SMAD3P84022 425 aaKnown RBP13.8□□□□□ -0.2
VMP1-202ENST00000585847 KCNA1Q09470 495 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 UBXN11Q5T124 520 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 ANKRD40Q6AI12 368 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 SMYD5Q6GMV2 418 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 SLC39A4Q6P5W5 647 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 CNKSR3Q6P9H4 555 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 LRRC55Q6ZSA7 311 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 ZNF365Q70YC5 407 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 FRMD5Q7Z6J6 570 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 MAP4K3Q8IVH8 894 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 CCDC150Q8NCX0 1101 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 CPB2Q96IY4 423 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 MED15Q96RN5 788 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 INO80BQ9C086 356 aaPredicted RBP13.8□□□□□ -0.2
VMP1-202ENST00000585847 SEMA6BQ9H3T3 888 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 AGPAT5Q9NUQ2 364 aa13.8□□□□□ -0.2
VMP1-202ENST00000585847 LGALS16A8MUM7 142 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 ACKR2O00590 384 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 GPR182O15218 404 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 FOSL2P15408 326 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 ARF4P18085 180 aaPredicted RBP13.79□□□□□ -0.2
VMP1-202ENST00000585847 STX17P56962 302 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 NFX1Q12986 1120 aaKnown RBP13.79□□□□□ -0.2
VMP1-202ENST00000585847 PAK2Q13177 524 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 FKBP15Q5T1M5 1219 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 RASIP1Q5U651 963 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 EEF1DP3Q658K8 133 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 ZBTB8OSQ8IWT0 167 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 RPUSD2Q8IZ73 545 aaKnown RBP13.79□□□□□ -0.2
VMP1-202ENST00000585847 MYLIPQ8WY64 445 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 SEPT8Q92599 483 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 RNPC3Q96LT9 517 aaKnown RBP13.79□□□□□ -0.2
VMP1-202ENST00000585847 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
VMP1-202ENST00000585847 SRRTQ9BXP5 876 aaKnown RBP13.79□□□□□ -0.2
VMP1-202ENST00000585847 HAPLN2Q9GZV7 340 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms