RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 K7ERI5 159 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 BUB1O43683 1085 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 SORBS3O60504 671 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 PALMO75781 387 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 ZRANB2O95218 330 aaKnown RBP eCLIP12.18□□□□□ -0.46
LIG3-204ENST00000585740 TMEM253P0C7T8 217 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 ZSCAN20P17040 1043 aaPredicted RBP12.18□□□□□ -0.46
LIG3-204ENST00000585740 GLRA2P23416 452 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 TCF7P36402 384 aaPredicted RBP12.18□□□□□ -0.46
LIG3-204ENST00000585740 NOP2P46087 812 aaKnown RBP12.18□□□□□ -0.46
LIG3-204ENST00000585740 GCLCP48506 637 aaPredicted RBP12.18□□□□□ -0.46
LIG3-204ENST00000585740 GTF2A2P52657 109 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 NOGQ13253 232 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 TTLL4Q14679 1199 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 PSMD6Q15008 389 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 Q3C1V9 767 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 MAP9Q49MG5 647 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 MEI1Q5TIA1 1274 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 PHLDB3Q6NSJ2 640 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 CC2D1AQ6P1N0 951 aaPredicted RBP12.18□□□□□ -0.46
LIG3-204ENST00000585740 WDR93Q6P2C0 686 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 TAS1R3Q7RTX0 852 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 MMGT1Q8N4V1 131 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 FBXL13Q8NEE6 735 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 GPRC5AQ8NFJ5 357 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 PLEKHO2Q8TD55 490 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 ASAP3Q8TDY4 903 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 SAAL1Q96ER3 474 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 CAPZA3Q96KX2 299 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 FGD4Q96M96 766 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 NT5C1BQ96P26 610 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 MMS19Q96T76 1030 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 GPR20Q99678 358 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 AGPAT1Q99943 283 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 SYT11Q9BT88 431 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 C2orf40Q9H1Z8 148 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 TXNRD2Q9NNW7 524 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 SALL4Q9UJQ4 1053 aa12.18□□□□□ -0.46
LIG3-204ENST00000585740 LRRIQ4A6NIV6 560 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 ADCY3O60266 1144 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 SRGAP2O75044 1071 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 GJA5P36382 358 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 MXD4Q14582 209 aaPredicted RBP12.17□□□□□ -0.46
LIG3-204ENST00000585740 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 WDR78Q5VTH9 848 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 ZPBP2Q6X784 338 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 CREG2Q8IUH2 290 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 ARHGEF19Q8IW93 802 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 ZBTB8OSQ8IWT0 167 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 DHX37Q8IY37 1157 aaKnown RBP12.17□□□□□ -0.46
LIG3-204ENST00000585740 ABRAQ8N0Z2 381 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 KRT222Q8N1A0 295 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 LNX1Q8TBB1 728 aaPredicted RBP12.17□□□□□ -0.46
LIG3-204ENST00000585740 ATP8B4Q8TF62 1192 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 SCFD2Q8WU76 684 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 PSPC1Q8WXF1 523 aaKnown RBP12.17□□□□□ -0.46
LIG3-204ENST00000585740 CTNNBL1Q8WYA6 563 aaPredicted RBP12.17□□□□□ -0.46
LIG3-204ENST00000585740 DHX38Q92620 1227 aaKnown RBP12.17□□□□□ -0.46
LIG3-204ENST00000585740 GLG1Q92896 1179 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 TMEM143Q96AN5 459 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 PBKQ96KB5 322 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 FNBP1Q96RU3 617 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 PACSIN1Q9BY11 444 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 SMARCAD1Q9H4L7 1026 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 VTA1Q9NP79 307 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 RAB20Q9NX57 234 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 FAM53CQ9NYF3 392 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 AGO2Q9UKV8 859 aaKnown RBP12.17□□□□□ -0.46
LIG3-204ENST00000585740 DIS3Q9Y2L1 958 aaKnown RBP12.17□□□□□ -0.46
LIG3-204ENST00000585740 TELO2Q9Y4R8 837 aa12.17□□□□□ -0.46
LIG3-204ENST00000585740 ANKRD62A6NC57 917 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 FOXN3O00409 490 aaPredicted RBP12.16□□□□□ -0.46
LIG3-204ENST00000585740 STRNO43815 780 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 HBP1O60381 514 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 PEX10O60683 326 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 PGK2P07205 417 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 RHOXF2BP0C7M4 288 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 AP3M2P53677 418 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 GALCP54803 685 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 HUNKP57058 714 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 CLDN10P78369 228 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 TFDP1Q14186 410 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 RPS6KA1Q15418 735 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 SURF1Q15526 300 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 LY6KQ17RY6 165 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 GLE1Q53GS7 698 aaKnown RBP12.16□□□□□ -0.46
LIG3-204ENST00000585740 NFRKBQ6P4R8 1299 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 CCDC62Q6P9F0 684 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 ZNF467Q7Z7K2 595 aaPredicted RBP12.16□□□□□ -0.46
LIG3-204ENST00000585740 ANKRD23Q86SG2 305 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 FAM71AQ8IYT1 594 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 NOA1Q8NC60 698 aaKnown RBP12.16□□□□□ -0.46
LIG3-204ENST00000585740 TPCN2Q8NHX9 752 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 RFFLQ8WZ73 363 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 SHC3Q92529 594 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 CCDC127Q96BQ5 260 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 RHOXF2Q9BQY4 288 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 FAM213AQ9BRX8 229 aa12.16□□□□□ -0.46
LIG3-204ENST00000585740 SELENOOQ9BVL4 669 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms