RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 GTF2BQ00403 316 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 TPD52L1Q16890 204 aaPredicted RBP18.29■□□□□ 0.52
GCDH-203ENST00000585420 ZNF697Q5TEC3 545 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 CDCA2Q69YH5 1023 aaPredicted RBP18.29■□□□□ 0.52
GCDH-203ENST00000585420 FAM43BQ6ZT52 329 aaPredicted RBP18.29■□□□□ 0.52
GCDH-203ENST00000585420 DEFB123Q8N688 67 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 ENOX1Q8TC92 643 aaKnown RBP18.29■□□□□ 0.52
GCDH-203ENST00000585420 MED15Q96RN5 788 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 STRA6Q9BX79 667 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 SEMA6BQ9H3T3 888 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 ZNF576Q9H609 170 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 SLC28A3Q9HAS3 691 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 CHST12Q9NRB3 414 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 C1orf112Q9NSG2 853 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 AGPAT5Q9NUQ2 364 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 INSL6Q9Y581 213 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 AMHR2Q16671 573 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 CENPPQ6IPU0 288 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 SPRED2Q7Z698 418 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 NPAS4Q8IUM7 802 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 SYCP3Q8IZU3 236 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 YME1L1Q96TA2 773 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 TSG101Q99816 390 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 ARHGAP28Q9P2N2 729 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 NFE2L3Q9Y4A8 694 aa18.29■□□□□ 0.52
GCDH-203ENST00000585420 TSPAN1O60635 241 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 DGKIO75912 1065 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 ERLIN2O94905 339 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 ABCD1P33897 745 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 HOXD13P35453 343 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 TPM4P67936 248 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 NCAPHQ15003 741 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 SPATA1Q5VX52 437 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 PPP2R2DQ66LE6 453 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 ANKRD40Q6AI12 368 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 TWF2Q6IBS0 349 aaKnown RBP18.28■□□□□ 0.52
GCDH-203ENST00000585420 ZBTB8OSQ8IWT0 167 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 CPB2Q96IY4 423 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 ACCSQ96QU6 501 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 KCTD10Q9H3F6 313 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 TMEM206Q9H813 350 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 RC3H2Q9HBD1 1191 aaKnown RBP18.28■□□□□ 0.52
GCDH-203ENST00000585420 TBX20Q9UMR3 447 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 PCDHB7Q9Y5E2 793 aa18.28■□□□□ 0.52
GCDH-203ENST00000585420 A0A0U1RQF3 1178 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 B4GALT5O43286 388 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 TAP1Q03518 808 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 LRRC63Q05C16 580 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 PCBP1Q15365 356 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■■■■ 36.4
GCDH-203ENST00000585420 TTI2Q6NXR4 508 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 ZNF689Q96CS4 500 aaPredicted RBP18.27■□□□□ 0.52
GCDH-203ENST00000585420 HVCN1Q96D96 273 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 FZD8Q9H461 694 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 GRPEL1Q9HAV7 217 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 LRFN2Q9ULH4 789 aa18.27■□□□□ 0.52
GCDH-203ENST00000585420 TMEM265A0A087WTH1 108 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 K7ERI5 159 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 STAG3L1P0CL83 205 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 SCP2P22307 547 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 GATMP50440 423 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 STRN3Q13033 797 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 ECHDC2Q86YB7 292 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 MAP4K3Q8IVH8 894 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 C2orf40Q9H1Z8 148 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 CERS4Q9HA82 394 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 TYW1Q9NV66 732 aaKnown RBP18.26■□□□□ 0.51
GCDH-203ENST00000585420 FANCLQ9NW38 375 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 TMEM161AQ9NX61 479 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 EXOC7Q9UPT5 735 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 USP20Q9Y2K6 914 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 ZMYM2Q9UBW7 1377 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 PHLPP2Q6ZVD8 1323 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 LINC01553A4QN01 128 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 TTLL13PA6NNM8 815 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 CALUO43852 315 aaPredicted RBP18.26■□□□□ 0.51
GCDH-203ENST00000585420 EDN1P05305 212 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 ARF4P18085 180 aaPredicted RBP18.26■□□□□ 0.51
GCDH-203ENST00000585420 EFNA5P52803 228 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 GRIN2CQ14957 1233 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 HS2ST1Q7LGA3 356 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 CDR2LQ86X02 465 aaPredicted RBP18.26■□□□□ 0.51
GCDH-203ENST00000585420 CSGALNACT2Q8N6G5 542 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 SP7Q8TDD2 431 aaPredicted RBP18.26■□□□□ 0.51
GCDH-203ENST00000585420 TRAIPQ9BWF2 469 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 CCDC113Q9H0I3 377 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 GBP3Q9H0R5 595 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 IKZF4Q9H2S9 585 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 ELAC1Q9H777 363 aaKnown RBP18.26■□□□□ 0.51
GCDH-203ENST00000585420 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
GCDH-203ENST00000585420 PDXKO00764 312 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 FGFR1P11362 822 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 ATF7P17544 494 aaPredicted RBP18.25■□□□□ 0.51
GCDH-203ENST00000585420 MAPK6Q16659 721 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 ZCWPW2Q504Y3 356 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 HSP90AA4PQ58FG1 418 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 UBXN11Q5T124 520 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 PPP4R3CPQ6ZMV5 832 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 TAS1R3Q7RTX0 852 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 ZNF598Q86UK7 904 aaKnown RBP18.25■□□□□ 0.51
GCDH-203ENST00000585420 RNF169Q8NCN4 708 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms