RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	EDA	Q92838	391 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	BORCS6	Q96GS4	357 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	UIMC1	Q96RL1	719 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	KLC2	Q9H0B6	622 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.24	□□□□□ -1.73	3e-6	■■■■□ 24.6
MSI2-215	ENST00000582453	DDX56	Q9NY93	547 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	PLA2G3	Q9NZ20	509 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	KLHL42	Q9P2K6	505 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	PRSS50	Q9UI38	385 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	MCM8	Q9UJA3	840 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	USP18	Q9UMW8	372 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	JAG2	Q9Y219	1238 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	ZC3H13	Q5T200	1668 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	ZMYM3	Q14202	1370 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	SIGLEC1	Q9BZZ2	1709 aa		4.24	□□□□□ -1.73
MSI2-215	ENST00000582453	WASHC2C	Q9Y4E1	1318 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	MROH2A	A6NES4	1674 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	GCC2	Q8IWJ2	1684 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453		A0A1W2PRX2	142 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	GOLGA8B	A8MQT2	603 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	C1QTNF3-AMACR	E9PGA6	284 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	TOX4	O94842	621 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	CLEC2L	P0C7M8	214 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	ENPP1	P22413	925 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	KIR2DL3	P43628	341 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	ADAM8	P78325	824 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.23	□□□□□ -1.73	2e-6	■■■■□ 20
MSI2-215	ENST00000582453	TRIM25	Q14258	630 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	GRM7	Q14831	915 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	R3HDM1	Q15032	1099 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	PITRM1	Q5JRX3	1037 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	KRT40	Q6A162	431 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	LMBR1L	Q6UX01	489 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	ADGRE4P	Q86SQ3	457 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	LYSMD2	Q8IV50	215 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	SLC41A1	Q8IVJ1	513 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	GLB1L2	Q8IW92	636 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	ATL2	Q8NHH9	583 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	FAM89A	Q96GI7	184 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	RAX2	Q96IS3	184 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	RPL10L	Q96L21	214 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	GPHA2	Q96T91	129 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	AGO3	Q9H9G7	860 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	METTL14	Q9HCE5	456 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	TSC22D4	Q9Y3Q8	395 aa		4.23	□□□□□ -1.73
MSI2-215	ENST00000582453	PTPRT	O14522	1441 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	NOS1	P29475	1434 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	EFCAB6	Q5THR3	1501 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	IQGAP3	Q86VI3	1631 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	MADD	Q8WXG6	1647 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	NRP1	O14786	923 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	MUSK	O15146	869 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	LY86	O95711	162 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	CDKN1C	P49918	316 aa	Predicted RBP	4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	KRTAP10-2	P60368	255 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	CD69	Q07108	199 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	FOXL1	Q12952	345 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	SPIDR	Q14159	915 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	UGT8	Q16880	541 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	CT83	Q5H943	113 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	ZNF585A	Q6P3V2	769 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	GGT6	Q6P531	493 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	LHFPL2	Q6ZUX7	228 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	GAREM2	Q75VX8	874 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	PRPF38A	Q8NAV1	312 aa	Known RBP	4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	PIK3C3	Q8NEB9	887 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	LMBR1	Q8WVP7	490 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	PAWR	Q96IZ0	340 aa	Known RBP	4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	MPHOSPH9	Q99550	1183 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	GPR20	Q99678	358 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	KCTD10	Q9H3F6	313 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	IL23A	Q9NPF7	189 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	EVL	Q9UI08	416 aa	Predicted RBP	4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	ATP8A1	Q9Y2Q0	1164 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	TESMIN	Q9Y4I5	508 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	CDY2A	Q9Y6F7	541 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	NUP155	O75694	1391 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	RAB3GAP2	Q9H2M9	1393 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	NLRP1	Q9C000	1473 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453	SPATA31D1	Q6ZQQ2	1576 aa		4.22	□□□□□ -1.73
MSI2-215	ENST00000582453		A0A1W2PR48	441 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	GOLGA8A	A7E2F4	631 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453		K7ESF4	209 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	MARCH6	O60337	910 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	PRKD3	O94806	890 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	LPL	P06858	475 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	PDGFRB	P09619	1106 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	MTHFD2	P13995	350 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	ACO1	P21399	889 aa	Known RBP	4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	MSX2	P35548	267 aa	Predicted RBP	4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	LGALS4	P56470	323 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	MEF2A	Q02078	507 aa	Predicted RBP	4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	HHEX	Q03014	270 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	MGAT5	Q09328	741 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	ACAP1	Q15027	740 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	PRKD1	Q15139	912 aa	Predicted RBP	4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	CDSN	Q15517	529 aa		4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
MSI2-215	ENST00000582453	MAMDC4	Q6UXC1	1216 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms