RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 FAM178BQ8IXR5 827 aa18.02■□□□□ 0.48
IFT20-210ENST00000580357 PDILTQ8N807 584 aa18.02■□□□□ 0.48
IFT20-210ENST00000580357 MRPS27Q92552 414 aaKnown RBP18.02■□□□□ 0.48
IFT20-210ENST00000580357 APOL6Q9BWW8 343 aa18.02■□□□□ 0.48
IFT20-210ENST00000580357 RNF39Q9H2S5 420 aa18.02■□□□□ 0.48
IFT20-210ENST00000580357 TNMDQ9H2S6 317 aa18.02■□□□□ 0.48
IFT20-210ENST00000580357 ST6GALNAC4Q9H4F1 302 aa18.02■□□□□ 0.48
IFT20-210ENST00000580357 FAN1Q9Y2M0 1017 aa18.02■□□□□ 0.48
IFT20-210ENST00000580357 HES2Q9Y543 173 aa18.02■□□□□ 0.48
IFT20-210ENST00000580357 NLRC5Q86WI3 1866 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 MYMKA6NI61 221 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 TTLL13PA6NNM8 815 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 TOM1L1O75674 476 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 GALTP07902 379 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 MCF2P10911 925 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 CMA1P23946 247 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 SKIV2LQ15477 1246 aaKnown RBP18.01■□□□□ 0.47
IFT20-210ENST00000580357 RESP18Q5W5W9 173 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 DYMQ7RTS9 669 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 TAS1R3Q7RTX0 852 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 MICAL1Q8TDZ2 1067 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 LEO1Q8WVC0 666 aaPredicted RBP18.01■□□□□ 0.47
IFT20-210ENST00000580357 RPS6KC1Q96S38 1066 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 GAD1Q99259 594 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 CCDC94Q9BW85 323 aaPredicted RBP18.01■□□□□ 0.47
IFT20-210ENST00000580357 TARS2Q9BW92 718 aaKnown RBP18.01■□□□□ 0.47
IFT20-210ENST00000580357 NXF3Q9H4D5 531 aaKnown RBP18.01■□□□□ 0.47
IFT20-210ENST00000580357 PTPRHQ9HD43 1115 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 KBTBD4Q9NVX7 518 aa18.01■□□□□ 0.47
IFT20-210ENST00000580357 TTC28Q96AY4 2481 aa18■□□□□ 0.47
IFT20-210ENST00000580357 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
IFT20-210ENST00000580357 MYH15Q9Y2K3 1946 aa18■□□□□ 0.47
IFT20-210ENST00000580357 A0A087X0B3 334 aa18■□□□□ 0.47
IFT20-210ENST00000580357 FSD2A1L4K1 749 aa18■□□□□ 0.47
IFT20-210ENST00000580357 ZC3H11AO75152 810 aaKnown RBP eCLIP18■□□□□ 0.47
IFT20-210ENST00000580357 POMCP01189 267 aa18■□□□□ 0.47
IFT20-210ENST00000580357 AKAP5P24588 427 aa18■□□□□ 0.47
IFT20-210ENST00000580357 YARSP54577 528 aaKnown RBP18■□□□□ 0.47
IFT20-210ENST00000580357 GTF2BQ00403 316 aa18■□□□□ 0.47
IFT20-210ENST00000580357 KYAT1Q16773 422 aa18■□□□□ 0.47
IFT20-210ENST00000580357 AAK1Q2M2I8 961 aa18■□□□□ 0.47
IFT20-210ENST00000580357 EEF1DP3Q658K8 133 aa18■□□□□ 0.47
IFT20-210ENST00000580357 MPZL3Q6UWV2 235 aa18■□□□□ 0.47
IFT20-210ENST00000580357 CCDC65Q8IXS2 484 aa18■□□□□ 0.47
IFT20-210ENST00000580357 SLC39A11Q8N1S5 342 aa18■□□□□ 0.47
IFT20-210ENST00000580357 ATXN2LQ8WWM7 1075 aaKnown RBP18■□□□□ 0.47
IFT20-210ENST00000580357 DNAJC19Q96DA6 116 aa18■□□□□ 0.47
IFT20-210ENST00000580357 TMEM169Q96HH4 297 aa18■□□□□ 0.47
IFT20-210ENST00000580357 NGRNQ9NPE2 291 aaKnown RBP18■□□□□ 0.47
IFT20-210ENST00000580357 TLR9Q9NR96 1032 aa18■□□□□ 0.47
IFT20-210ENST00000580357 TOPORSQ9NS56 1045 aaPredicted RBP18■□□□□ 0.47
IFT20-210ENST00000580357 USP25Q9UHP3 1055 aa18■□□□□ 0.47
IFT20-210ENST00000580357 TBX20Q9UMR3 447 aa18■□□□□ 0.47
IFT20-210ENST00000580357 K7ENM7 598 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 POLR2DO15514 142 aaKnown RBP17.99■□□□□ 0.47
IFT20-210ENST00000580357 CLDN3O15551 220 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 THP07101 528 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 PROZP22891 400 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 MLH1P40692 756 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 GRM5P41594 1212 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 GRIK3Q13003 919 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 E2F4Q16254 413 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 ZNF568Q3ZCX4 644 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 HERC4Q5GLZ8 1057 aaPredicted RBP17.99■□□□□ 0.47
IFT20-210ENST00000580357 CNNM4Q6P4Q7 775 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 ZNF720Q7Z2F6 126 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 ZNF280BQ86YH2 543 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 HLA-CQ95604 372 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 DHX58Q96C10 678 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 HVCN1Q96D96 273 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 BICD1Q96G01 975 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 COLEC11Q9BWP8 271 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 GBP3Q9H0R5 595 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 PANK4Q9NVE7 773 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 SNTG2Q9NY99 539 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 HCSTQ9UBK5 93 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 KCNH3Q9ULD8 1083 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 USP20Q9Y2K6 914 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 PCDHB13Q9Y5F0 798 aa17.99■□□□□ 0.47
IFT20-210ENST00000580357 DDHD2O94830 711 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 PIGRP01833 764 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 EDN1P05305 212 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 IDEP14735 1019 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 LIG4P49917 911 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 ALCAMQ13740 583 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 CAMK1Q14012 370 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 SLFN12LQ6IEE8 588 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 DDX53Q86TM3 631 aaKnown RBP17.98■□□□□ 0.47
IFT20-210ENST00000580357 COLGALT2Q8IYK4 626 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 CEP57L1Q8IYX8 460 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 IGSF21Q96ID5 467 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 ACAP3Q96P50 834 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 CDT1Q9H211 546 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 MRPL44Q9H9J2 332 aaKnown RBP17.98■□□□□ 0.47
IFT20-210ENST00000580357 OLFML3Q9NRN5 406 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 MIOSQ9NXC5 875 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 THEGQ9P2T0 379 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 EXOC7Q9UPT5 735 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 MYH11P35749 1972 aa17.98■□□□□ 0.47
IFT20-210ENST00000580357 PRUNE2Q8WUY3 3088 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms