RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 HDAC6Q9UBN7 1215 aa18.32■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PLAGL2Q9UPG8 496 aa18.32■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 SOWAHDA6NJG2 315 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ZNF233A6NK53 670 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 LRRIQ3A6PVS8 624 aaPredicted RBP18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 P4HA2O15460 535 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CLDN3O15551 220 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 GPR32O75388 356 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ACTN1P12814 892 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 WNT7BP56706 349 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CLDN10P78369 228 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 MYL7Q01449 175 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ZBTB41Q5SVQ8 909 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 KLHDC7AQ5VTJ3 777 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TRIM65Q6PJ69 517 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 RAD9BQ6WBX8 426 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 RAET1EQ8TD07 263 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PPP1R16BQ96T49 567 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 MSTO1Q9BUK6 570 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 SPC25Q9HBM1 224 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PRMT7Q9NVM4 692 aaPredicted RBP18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 FBXL5Q9UKA1 691 aa18.31■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TREHO43280 583 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ACOT2P49753 483 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 MTF1Q14872 753 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PSMD6Q15008 389 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CXCL17Q6UXB2 119 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TMEM117Q9H0C3 514 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CNTNAP2Q9UHC6 1331 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 USP27XA6NNY8 438 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 LDHAP00338 332 aaKnown RBP18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CYP2C9P11712 490 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 UCHL3P15374 230 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 C1QTNF8P60827 252 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 POLR2FP61218 127 aaKnown RBP18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ZNF200P98182 395 aaPredicted RBP18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PRPF4BQ13523 1007 aaKnown RBP18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 EPC2Q52LR7 807 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ATF7IP2Q5U623 682 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PDXDC1Q6P996 788 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TMTC1Q8IUR5 882 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ZNF397Q8NF99 534 aaPredicted RBP18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CHP1Q99653 195 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 DDX20Q9UHI6 824 aaKnown RBP18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TNFSF13BQ9Y275 285 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 COQ4Q9Y3A0 265 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PTCH2Q9Y6C5 1203 aa18.3■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 C17orf102A2RUQ5 167 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 LRRC53A6NM62 1247 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ZEB2O60315 1214 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 N4BP1O75113 896 aaKnown RBP18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CSDE1O75534 798 aaKnown RBP18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CLCN1P35523 988 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 GCLMP48507 274 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PRMT2P55345 433 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CDK17Q00537 523 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 EEF1DP3Q658K8 133 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 MPZL3Q6UWV2 235 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CYP26C1Q6V0L0 522 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 NLRP7Q8WX94 980 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CCDC127Q96BQ5 260 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 POP1Q99575 1024 aaKnown RBP18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 FAM49AQ9H0Q0 323 aaPredicted RBP18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 NLRC4Q9NPP4 1024 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TOPORSQ9NS56 1045 aaPredicted RBP18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 GTF2IRD1Q9UHL9 959 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 AJAP1Q9UKB5 411 aaPredicted RBP18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TRIM17Q9Y577 477 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 FHOD1Q9Y613 1164 aa18.29■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 GTF2H1P32780 548 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 MXI1P50539 228 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TOGARAM2Q6ZUX3 1019 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 RRAGAQ7L523 313 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 SRGAP1Q7Z6B7 1085 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 SLAIN1Q8ND83 568 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 INTS2Q9H0H0 1204 aaKnown RBP18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 TMEM8AQ9HCN3 771 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 FRMPD3Q5JV73 1810 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 OGTO15294 1046 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 INHAP05111 366 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ASGR1P07306 291 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CDC42EP1Q00587 391 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 HSP90AA2PQ14568 343 aaPredicted RBP18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 ARHGEF6Q15052 776 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 KIZQ2M2Z5 673 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 NBPF20Q3BBV1 942 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 C15orf39Q6ZRI6 1047 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CACNA2D4Q7Z3S7 1137 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 BRSK2Q8IWQ3 736 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 C7orf31Q8N865 590 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 SH3TC2Q8TF17 1288 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 DNAJB3Q8WWF6 145 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 SYN2Q92777 582 aaPredicted RBP18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CDT1Q9H211 546 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 CDHR5Q9HBB8 845 aa18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 RBAKQ9NYW8 714 aaPredicted RBP18.28■□□□□ 0.52
CCDC144NL-AS1-213ENST00000580278 PTPRJQ12913 1337 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms