RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 P2RX7Q99572 595 aaKnown RBP10.88□□□□□ -0.67
MSI2-209ENST00000579483 SEPT5Q99719 369 aaPredicted RBP10.88□□□□□ -0.67
MSI2-209ENST00000579483 TUT1Q9H6E5 874 aaKnown RBP10.88□□□□□ -0.67
MSI2-209ENST00000579483 PXMP2Q9NR77 195 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 LGALS16A8MUM7 142 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 ZRANB2O95218 330 aaKnown RBP eCLIP10.88□□□□□ -0.67
MSI2-209ENST00000579483 SLC4A1P02730 911 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 PTPRAP18433 802 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 SREBF1P36956 1147 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 EIF4A3P38919 411 aaKnown RBP10.88□□□□□ -0.67
MSI2-209ENST00000579483 VGLL4Q14135 290 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 FBXO16Q8IX29 292 aaPredicted RBP10.88□□□□□ -0.67
MSI2-209ENST00000579483 MRPS31Q92665 395 aaKnown RBP10.88□□□□□ -0.67
MSI2-209ENST00000579483 LRRC4BQ9NT99 713 aa10.88□□□□□ -0.67
MSI2-209ENST00000579483 TMEM62Q0P6H9 643 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 ZNF235Q14590 738 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 ANKRD20A3Q5VUR7 823 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 TDRD10Q5VZ19 366 aaKnown RBP10.87□□□□□ -0.67
MSI2-209ENST00000579483 KLC3Q6P597 504 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 HDAC11Q96DB2 347 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 MKNK1Q9BUB5 465 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 NT5C1AQ9BXI3 368 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 EXTL3O43909 919 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 NPTXRO95502 500 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 NAMPTP43490 491 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 NIPA1Q7RTP0 329 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 ANKRD23Q86SG2 305 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 PDIK1LQ8N165 341 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 PANX2Q96RD6 677 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 PDCD2LQ9BRP1 358 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 WDR18Q9BV38 432 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 FNDC3AQ9Y2H6 1198 aaKnown RBP10.87□□□□□ -0.67
MSI2-209ENST00000579483 EBAG9O00559 213 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 P4HA2O15460 535 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 BASP1P80723 227 aaKnown RBP10.87□□□□□ -0.67
MSI2-209ENST00000579483 LAMB3Q13751 1172 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 PTPAQ15257 358 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 KRT31Q15323 416 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 PDXDC1Q6P996 788 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 STOX1Q6ZVD7 989 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 TLK2Q86UE8 772 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 HSPH1Q92598 858 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 PXDNQ92626 1479 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 EMSYQ7Z589 1322 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 EFCAB8A8MWE9 144 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 PQBP1O60828 265 aaKnown RBP10.87□□□□□ -0.67
MSI2-209ENST00000579483 RNF40O75150 1001 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 SLC2A3P11169 496 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 AXLP30530 894 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 DYNLT1P63172 113 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 APBA1Q02410 837 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 RBL2Q08999 1139 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 ACVR2BQ13705 512 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 NCOA4Q13772 614 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 PREPLQ4J6C6 727 aaPredicted RBP10.87□□□□□ -0.67
MSI2-209ENST00000579483 APOBEC3HQ6NTF7 200 aaKnown RBP10.87□□□□□ -0.67
MSI2-209ENST00000579483 RIOX2Q8IUF8 465 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 LRRC71Q8N4P6 559 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 APBA2Q99767 749 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 C7orf25Q9BPX7 421 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 EMILIN2Q9BXX0 1053 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 CALCOCO1Q9P1Z2 691 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 ANAPC7Q9UJX3 599 aa10.87□□□□□ -0.67
MSI2-209ENST00000579483 ERICH4A6NGS2 130 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 EDRF1Q3B7T1 1238 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 FAM102AQ5T9C2 384 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 DDX53Q86TM3 631 aaKnown RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 ITIH5Q86UX2 942 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 SCG3Q8WXD2 468 aaKnown RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 MOCS2O96007 188 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 ZBTB48P10074 688 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 SAT1P21673 171 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 HARS2P49590 506 aaKnown RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 FSCN1Q16658 493 aaKnown RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 CCDC13Q8IYE1 715 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 SYTL5Q8TDW5 730 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 PRG3Q9Y2Y8 225 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 PI4K2BG5E9Z4 385 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 ALDH2P05091 517 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 STX2P32856 288 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 TROAPQ12815 778 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 PCGF5Q86SE9 256 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 CDKL3Q8IVW4 592 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 ATP8B4Q8TF62 1192 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 NHEJ1Q9H9Q4 299 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 SAMSN1Q9NSI8 373 aaKnown RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 PARVAQ9NVD7 372 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 TMEM51Q9NW97 253 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 GPC4O75487 556 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 HPDP32754 393 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 ETF1P62495 437 aaKnown RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 IKBKEQ14164 716 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 NFE2Q16621 373 aaPredicted RBP10.86□□□□□ -0.67
MSI2-209ENST00000579483 ZNF280DQ6N043 979 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 TMC7Q7Z402 723 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 TRIM9Q9C026 710 aa10.86□□□□□ -0.67
MSI2-209ENST00000579483 PPP1R12AO14974 1030 aaPredicted RBP10.85□□□□□ -0.67
MSI2-209ENST00000579483 EFCAB14O75071 495 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms