RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 TMC2Q8TDI7 906 aa18.41■□□□□ 0.54
SREBF1-218ENST00000578469 PRIMPOLQ96LW4 560 aa18.41■□□□□ 0.54
SREBF1-218ENST00000578469 FBXL18Q96ME1 805 aa18.41■□□□□ 0.54
SREBF1-218ENST00000578469 SPAG5Q96R06 1193 aa18.41■□□□□ 0.54
SREBF1-218ENST00000578469 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
SREBF1-218ENST00000578469 DEF6Q9H4E7 631 aa18.41■□□□□ 0.54
SREBF1-218ENST00000578469 PRKAG2Q9UGJ0 569 aa18.41■□□□□ 0.54
SREBF1-218ENST00000578469 STYXL1Q9Y6J8 313 aa18.41■□□□□ 0.54
SREBF1-218ENST00000578469 ZNF233A6NK53 670 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 EIF3CLB5ME19 914 aaKnown RBP18.4■□□□□ 0.54
SREBF1-218ENST00000578469 H3BRB1 525 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 EXTL3O43909 919 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 UCHL3P15374 230 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 MCCD1P59942 119 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-218ENST00000578469 ASIC2Q16515 512 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 CCL14Q16627 93 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 LHX8Q68G74 356 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 SLC39A4Q6P5W5 647 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 ZPBP2Q6X784 338 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 FMNL3Q8IVF7 1028 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 LRRC71Q8N4P6 559 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 METTL13Q8N6R0 699 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 ZNF592Q92610 1267 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 SAAL1Q96ER3 474 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 EIF3CQ99613 913 aaKnown RBP18.4■□□□□ 0.54
SREBF1-218ENST00000578469 C16orf70Q9BSU1 422 aa18.4■□□□□ 0.54
SREBF1-218ENST00000578469 TUT1Q9H6E5 874 aaKnown RBP18.4■□□□□ 0.54
SREBF1-218ENST00000578469 PMM2O15305 246 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 DYNC1LI2O43237 492 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-218ENST00000578469 C22orf31O95567 290 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 SERPING1P05155 500 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 ZNF286BP0CG31 522 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 SRGAP2CP0DJJ0 459 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 ACTN1P12814 892 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 RFX1P22670 979 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 TMOD1P28289 359 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 GTF2H1P32780 548 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.53
SREBF1-218ENST00000578469 ETF1P62495 437 aaKnown RBP18.39■□□□□ 0.53
SREBF1-218ENST00000578469 IGBP1P78318 339 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-218ENST00000578469 DRP2Q13474 957 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 RAPGEF1Q13905 1077 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 SPA17Q15506 151 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 MAPK6Q16659 721 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 ARHGAP29Q52LW3 1261 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 PRAMEF19Q5SWL8 479 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 CDCA2Q69YH5 1023 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-218ENST00000578469 RHPN2Q8IUC4 686 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 CBWD2Q8IUF1 395 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 RNF149Q8NC42 400 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 EHBP1Q8NDI1 1231 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 ACRBPQ8NEB7 543 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 TRAPPC12Q8WVT3 735 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 VTI1AQ96AJ9 217 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 MFSD14AQ96MC6 490 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 MRPL4Q9BYD3 311 aaKnown RBP18.39■□□□□ 0.53
SREBF1-218ENST00000578469 INTS2Q9H0H0 1204 aaKnown RBP18.39■□□□□ 0.53
SREBF1-218ENST00000578469 AP5M1Q9H0R1 490 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 AGO2Q9UKV8 859 aaKnown RBP18.39■□□□□ 0.53
SREBF1-218ENST00000578469 Q9Y3F1 56 aa18.39■□□□□ 0.53
SREBF1-218ENST00000578469 FRMPD3Q5JV73 1810 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 SSU72P8A0A1W2PR75 194 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 ADRB2P07550 413 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 ZNF865P0CJ78 1059 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-218ENST00000578469 KLRC1P26715 233 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 CYP2C19P33261 490 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 TERF1P54274 439 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 CYP24A1Q07973 514 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 PPFIA1Q13136 1202 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 CBWD6Q4V339 395 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 CBWD3Q5JTY5 395 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 CBWD5Q5RIA9 395 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 FAM109BQ6ICB4 259 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-218ENST00000578469 TRIM65Q6PJ69 517 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 TXLNBQ8N3L3 684 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 FAM213AQ9BRX8 229 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 TARS2Q9BW92 718 aaKnown RBP18.38■□□□□ 0.53
SREBF1-218ENST00000578469 SIX2Q9NPC8 291 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 AIPL1Q9NZN9 384 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 FLRT1Q9NZU1 646 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 GNEQ9Y223 722 aaKnown RBP18.38■□□□□ 0.53
SREBF1-218ENST00000578469 BZW2Q9Y6E2 419 aaKnown RBP18.38■□□□□ 0.53
SREBF1-218ENST00000578469 UNC80Q8N2C7 3258 aa18.38■□□□□ 0.53
SREBF1-218ENST00000578469 RRN3P2A6NIE6 340 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 A6NJR5 290 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 AKR1B10O60218 316 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 PRKCBP05771 671 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 EIF4A3P38919 411 aaKnown RBP18.37■□□□□ 0.53
SREBF1-218ENST00000578469 MXI1P50539 228 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 DLG4P78352 724 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 POU5F1BQ06416 359 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-218ENST00000578469 TDRD12Q587J7 1177 aaKnown RBP18.37■□□□□ 0.53
SREBF1-218ENST00000578469 DPY19L2P1Q6NXN4 242 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 KIAA1328Q86T90 577 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 TLK2Q86UE8 772 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.37■□□□□ 0.53
SREBF1-218ENST00000578469 PARD3BQ8TEW8 1205 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 CCDC127Q96BQ5 260 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms