RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	ACO2	Q99798	780 aa	Known RBP	27.8	■■■□□ 2.04
SRRM2-223	ENST00000575701	GBP3	Q9H0R5	595 aa		27.8	■■■□□ 2.04
SRRM2-223	ENST00000575701	STK39	Q9UEW8	545 aa		27.8	■■■□□ 2.04
SRRM2-223	ENST00000575701	GALT	P07902	379 aa		27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	AKAP5	P24588	427 aa		27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	AFF1	P51825	1210 aa	Known RBP	27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	MRPS5	P82675	430 aa	Known RBP	27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	ZNF280B	Q86YH2	543 aa		27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	RPS6KC1	Q96S38	1066 aa		27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	CUEDC2	Q9H467	287 aa		27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	USP20	Q9Y2K6	914 aa		27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	TDRD15	B5MCY1	1934 aa	Known RBP	27.79	■■■□□ 2.04
SRRM2-223	ENST00000575701	FSD2	A1L4K1	749 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	TRAK2	O60296	914 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	ME1	P48163	572 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	SCNN1G	P51170	649 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	GRIK3	Q13003	919 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	COL19A1	Q14993	1142 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	ZNF568	Q3ZCX4	644 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	ZPBP2	Q6X784	338 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	HAUS6	Q7Z4H7	955 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	ZFP42	Q96MM3	310 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	PTPRH	Q9HD43	1115 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	NGRN	Q9NPE2	291 aa	Known RBP	27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	DNAJB4	Q9UDY4	337 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	RCOR1	Q9UKL0	485 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	ZDHHC9	Q9Y397	364 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	PRUNE2	Q8WUY3	3088 aa		27.78	■■■□□ 2.04
SRRM2-223	ENST00000575701	FSCN2	O14926	492 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	DDHD2	O94830	711 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	ALDH2	P05091	517 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	IRS1	P35568	1242 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	SLC11A1	P49279	550 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	KRT85	P78386	507 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	DSC1	Q08554	894 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	BMS1	Q14692	1282 aa	Known RBP	27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	AXDND1	Q5T1B0	1012 aa	Predicted RBP	27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	FAM178B	Q8IXR5	827 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	MICAL1	Q8TDZ2	1067 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	DDX12P	Q92771	950 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	PABPC5	Q96DU9	382 aa	Known RBP	27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	IGSF21	Q96ID5	467 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	TARS2	Q9BW92	718 aa	Known RBP	27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	ZHX3	Q9H4I2	956 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	UBE2Z	Q9H832	354 aa	Predicted RBP	27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701	SNTG2	Q9NY99	539 aa		27.77	■■■□□ 2.04
SRRM2-223	ENST00000575701		A0A087X0B3	334 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	NT5C1B-RDH14	C9J2C7	533 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701		K7ENM7	598 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	NR1I2	O75469	434 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	TOM1L1	O75674	476 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	RECQL4	O94761	1208 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	CSPG5	O95196	566 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	MCF2	P10911	925 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	PROZ	P22891	400 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	SHC4	Q6S5L8	630 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	MPZL3	Q6UWV2	235 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	COLGALT2	Q8IYK4	626 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	PDILT	Q8N807	584 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	GSTCD	Q8NEC7	633 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	ASB2	Q96Q27	587 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	LRRC27	Q9C0I9	530 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	CDT1	Q9H211	546 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	SEL1L	Q9UBV2	794 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	PCDHA7	Q9UN72	937 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	FAN1	Q9Y2M0	1017 aa		27.76	■■■□□ 2.03
SRRM2-223	ENST00000575701	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	B4GALT3	O60512	393 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	GRM5	P41594	1212 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	ERVFC1	P60507	584 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	TJAP1	Q5JTD0	557 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	DYM	Q7RTS9	669 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	DDX53	Q86TM3	631 aa	Known RBP	27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	IQUB	Q8NA54	791 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	TCF25	Q9BQ70	676 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	TCHP	Q9BT92	498 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	CCDC94	Q9BW85	323 aa	Predicted RBP	27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	PANK2	Q9BZ23	570 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	TNMD	Q9H2S6	317 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	ENTPD7	Q9NQZ7	604 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	MIOS	Q9NXC5	875 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	FAM13B	Q9NYF5	915 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	KLK14	Q9P0G3	267 aa		27.75	■■■□□ 2.03
SRRM2-223	ENST00000575701	MYMK	A6NI61	221 aa		27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	GAP43	P17677	238 aa		27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	HYAL1	Q12794	435 aa		27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	CDCA3	Q99618	268 aa	Predicted RBP	27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	PYM1	Q9BRP8	204 aa	Known RBP	27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	ST6GALNAC4	Q9H4F1	302 aa		27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	TOPORS	Q9NS56	1045 aa	Predicted RBP	27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	TBX20	Q9UMR3	447 aa		27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	REV3L	O60673	3130 aa		27.74	■■■□□ 2.03
SRRM2-223	ENST00000575701	ABLIM1	O14639	778 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	NRP1	O14786	923 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	YARS	P54577	528 aa	Known RBP	27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	SMC1A	Q14683	1233 aa	Known RBP	27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	E2F4	Q16254	413 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	TMC7	Q7Z402	723 aa		27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	TMEM173	Q86WV6	379 aa	Predicted RBP	27.73	■■■□□ 2.03
SRRM2-223	ENST00000575701	DNAJC19	Q96DA6	116 aa		27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms