RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 RBPJLQ9UBG7 517 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 DMGDHQ9UI17 866 aaKnown RBP15.17■□□□□ 0.02
VPS33B-208ENST00000574755 ANKRD62A6NC57 917 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 OSBPP22059 807 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 ARL2P36404 184 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 RFC5P40937 340 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 KCTD2Q14681 263 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 Q3C1V9 767 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 CCNI2Q6ZMN8 369 aaPredicted RBP15.17■□□□□ 0.02
VPS33B-208ENST00000574755 FASTKD5Q7L8L6 764 aaKnown RBP15.17■□□□□ 0.02
VPS33B-208ENST00000574755 SLFN11Q7Z7L1 901 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 FAM71AQ8IYT1 594 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 CEP89Q96ST8 783 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 AZI2Q9H6S1 392 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 KIAA1586Q9HCI6 787 aa15.17■□□□□ 0.02
VPS33B-208ENST00000574755 SIP14410 1827 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 POLR3GO15318 223 aaPredicted RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 EXTL3O43909 919 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 SGPL1O95470 568 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 MYBL2P10244 700 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 SCP2P22307 547 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 EPS8L1Q8TE68 723 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 AFAP1L1Q8TED9 768 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 SHC3Q92529 594 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 RUBCNQ92622 972 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 PBKQ96KB5 322 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 MMP19Q99542 508 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 SELENOOQ9BVL4 669 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 PDE11AQ9HCR9 933 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 STIM2Q9P246 746 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 AGO2Q9UKV8 859 aaKnown RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 A0A0U1RQG5 324 aaPredicted RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 CYP26A1O43174 497 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 BUB1BO60566 1050 aaPredicted RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 ARIH2O95376 493 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 COPB2P35606 906 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 PRPF4BQ13523 1007 aaKnown RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 GLE1Q53GS7 698 aaKnown RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 EAPPQ56P03 285 aaPredicted RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 TAF3Q5VWG9 929 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 ARMC9Q7Z3E5 817 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 NT5DC3Q86UY8 548 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 SLC47A2Q86VL8 602 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 USP38Q8NB14 1042 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 HELQQ8TDG4 1101 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 ARHGEF26Q96DR7 871 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 FNBP1Q96RU3 617 aa15.16■□□□□ 0.02
VPS33B-208ENST00000574755 SUCLA2Q9P2R7 463 aaPredicted RBP15.16■□□□□ 0.02
VPS33B-208ENST00000574755 NOP56O00567 594 aaKnown RBP15.15■□□□□ 0.02
VPS33B-208ENST00000574755 CEP104O60308 925 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 FTLP02792 175 aaPredicted RBP15.15■□□□□ 0.02
VPS33B-208ENST00000574755 ACOT2P49753 483 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 ENPEPQ07075 957 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 MOGSQ13724 837 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 TARBP2Q15633 366 aaKnown RBP15.15■□□□□ 0.02
VPS33B-208ENST00000574755 NOP9Q86U38 636 aaKnown RBP15.15■□□□□ 0.02
VPS33B-208ENST00000574755 MSL3Q8N5Y2 521 aaKnown RBP15.15■□□□□ 0.02
VPS33B-208ENST00000574755 GLG1Q92896 1179 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 ZBTB9Q96C00 473 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 GDAP1L1Q96MZ0 367 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 ACP6Q9NPH0 428 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 ANKFY1Q9P2R3 1169 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 AMFRQ9UKV5 643 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 MCM3APO60318 1980 aa15.15■□□□□ 0.02
VPS33B-208ENST00000574755 TNNI1P19237 187 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 MARK3P27448 753 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 NLRP11P59045 1033 aaKnown RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 HSDL1Q3SXM5 330 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 KCNV1Q6PIU1 500 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 METTL13Q8N6R0 699 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 PSPC1Q8WXF1 523 aaKnown RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 FGD4Q96M96 766 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 ISCUQ9H1K1 167 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 ACBD3Q9H3P7 528 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 NOCTQ9UK39 431 aaKnown RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 STXBP5LQ9Y2K9 1186 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 STYXL1Q9Y6J8 313 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 KIAA0391O15091 583 aaKnown RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 PDE6CP51160 858 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 CAPSQ13938 189 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 TERF2Q15554 542 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 LMBRD2Q68DH5 695 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 SLFN12LQ6IEE8 588 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 RHOT2Q8IXI1 618 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 KCNN1Q92952 543 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 ZBTB45Q96K62 511 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 FAM84AQ96KN4 292 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 FAM167AQ96KS9 214 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 KRT12Q99456 494 aa15.14■□□□□ 0.01
VPS33B-208ENST00000574755 TARS2Q9BW92 718 aaKnown RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 ZCCHC17Q9NP64 241 aaKnown RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 ZNFX1Q9P2E3 1918 aaKnown RBP15.14■□□□□ 0.01
VPS33B-208ENST00000574755 H3BQF6 201 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 SOCS7O14512 581 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 RTN2O75298 545 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 MAFO75444 373 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-208ENST00000574755 PIGRP01833 764 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms