RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 EHMT1Q9H9B1 1298 aa16.8■□□□□ 0.28
NUP88-207ENST00000573584 NOCTQ9UK39 431 aaKnown RBP16.8■□□□□ 0.28
NUP88-207ENST00000573584 MGRN1O60291 552 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 IBSPP21815 317 aaPredicted RBP16.79■□□□□ 0.28
NUP88-207ENST00000573584 LLGL1Q15334 1064 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 TNFAIP8L3Q5GJ75 292 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 C1orf220Q5T0J3 134 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 STRIP1Q5VSL9 837 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 SLC47A2Q86VL8 602 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 FAM71AQ8IYT1 594 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 XXYLT1Q8NBI6 393 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 ZSWIM2Q8NEG5 633 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 ACCSQ96QU6 501 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.79■□□□□ 0.28
NUP88-207ENST00000573584 ECEL1O95672 775 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 ELF3P78545 371 aaPredicted RBP16.79■□□□□ 0.28
NUP88-207ENST00000573584 SIX1Q15475 284 aaPredicted RBP16.79■□□□□ 0.28
NUP88-207ENST00000573584 CNGA2Q16280 664 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 DACT2Q5SW24 774 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
NUP88-207ENST00000573584 B3GNT9Q6UX72 402 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 RPAINQ86UA6 219 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 TEX2Q8IWB9 1127 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 PPM1KQ8N3J5 372 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 MAGEC3Q8TD91 643 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
NUP88-207ENST00000573584 HSPBP1Q9NZL4 362 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 SPATA31A6Q5VVP1 1343 aa16.79■□□□□ 0.28
NUP88-207ENST00000573584 MXI1P50539 228 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 RWDD2BP57060 319 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 RASA3Q14644 834 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 MFSD5Q6N075 450 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 TRPM8Q7Z2W7 1104 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 GIMAP7Q8NHV1 300 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 PLEKHO2Q8TD55 490 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 CSRNP1Q96S65 589 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 TACO1Q9BSH4 297 aaKnown RBP16.78■□□□□ 0.28
NUP88-207ENST00000573584 TMEM117Q9H0C3 514 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 NSRP1Q9H0G5 558 aaKnown RBP16.78■□□□□ 0.28
NUP88-207ENST00000573584 PKD2L1Q9P0L9 805 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 SLC12A4Q9UP95 1085 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 GSTA1P08263 222 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
NUP88-207ENST00000573584 NBPF9Q3BBW0 867 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 RNF207Q6ZRF8 634 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 ACER1Q8TDN7 264 aa16.78■□□□□ 0.28
NUP88-207ENST00000573584 ROPN1BQ9BZX4 212 aaPredicted RBP16.78■□□□□ 0.28
NUP88-207ENST00000573584 ROPN1Q9HAT0 212 aaPredicted RBP16.78■□□□□ 0.28
NUP88-207ENST00000573584 UBR3Q6ZT12 1888 aa16.77■□□□□ 0.28
NUP88-207ENST00000573584 LONRF1Q17RB8 773 aa16.77■□□□□ 0.28
NUP88-207ENST00000573584 FAM133BQ5BKY9 247 aaKnown RBP16.77■□□□□ 0.28
NUP88-207ENST00000573584 TRMT10CQ7L0Y3 403 aaKnown RBP16.77■□□□□ 0.28
NUP88-207ENST00000573584 DYDC1Q8WWB3 177 aa16.77■□□□□ 0.28
NUP88-207ENST00000573584 ZNF653Q96CK0 615 aa16.77■□□□□ 0.28
NUP88-207ENST00000573584 KREMEN1Q96MU8 473 aa16.77■□□□□ 0.28
NUP88-207ENST00000573584 HOMER3Q9NSC5 361 aa16.77■□□□□ 0.28
NUP88-207ENST00000573584 MCM8Q9UJA3 840 aa16.77■□□□□ 0.28
NUP88-207ENST00000573584 MRPL11Q9Y3B7 192 aaKnown RBP16.77■□□□□ 0.28
NUP88-207ENST00000573584 ACSL3O95573 720 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 CYP1A2P05177 515 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 FMO1Q01740 532 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 ALCAMQ13740 583 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 LRRC14Q15048 493 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 MIGA2Q7L4E1 593 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 CCDC63Q8NA47 563 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 DDX23Q9BUQ8 820 aaKnown RBP16.77■□□□□ 0.27
NUP88-207ENST00000573584 LRRC19Q9H756 370 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 ARHGEF10LQ9HCE6 1279 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.77■□□□□ 0.27
NUP88-207ENST00000573584 EP400Q96L91 3159 aa16.77■□□□□ 0.27
NUP88-207ENST00000573584 CLDN3O15551 220 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 DLATP10515 647 aaKnown RBP16.76■□□□□ 0.27
NUP88-207ENST00000573584 SLC8A1P32418 973 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 NF2P35240 595 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 PDE6CP51160 858 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 MAP2K1Q02750 393 aaPredicted RBP16.76■□□□□ 0.27
NUP88-207ENST00000573584 E2F5Q15329 346 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 NSMFQ6X4W1 530 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 OTUD6AQ7L8S5 288 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 MIER3Q7Z3K6 550 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 C12orf56Q8IXR9 622 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 C12orf50Q8NA57 414 aaPredicted RBP16.76■□□□□ 0.27
NUP88-207ENST00000573584 C1orf54Q8WWF1 131 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 RIT2Q99578 217 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 CDC42EP4Q9H3Q1 356 aaKnown RBP16.76■□□□□ 0.27
NUP88-207ENST00000573584 CD2APQ9Y5K6 639 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 MAPTP10636 758 aaKnown RBP16.76■□□□□ 0.27
NUP88-207ENST00000573584 EZRP15311 586 aaKnown RBP16.76■□□□□ 0.27
NUP88-207ENST00000573584 MFAP3P55082 362 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 UVRAGQ9P2Y5 699 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 GTF3C4Q9UKN8 822 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 SYNPO2Q9UMS6 1093 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 GOLGA8IPA6NC78 632 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 GOLGA8JA6NMD2 632 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 SNX3O60493 162 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 ATP6V1G2O95670 118 aa16.76■□□□□ 0.27
NUP88-207ENST00000573584 PLS3P13797 630 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms