RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 A0A0A0MRY4 1105 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 TCRBV5S4A2TA0A5A2 114 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 H7BY64 318 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 FGF10O15520 208 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 CA12O43570 354 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 TIMM44O43615 452 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 B3GALT2O43825 422 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 GFRA3O60609 400 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 DTNBO60941 627 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 NFICP08651 508 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 GNAT1P11488 350 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 SRFP11831 508 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 MTHFD2P13995 350 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 PPP2R1AP30153 589 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 CHKAP35790 457 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 MAP2K2P36507 400 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 BCL6P41182 706 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 EPS15P42566 896 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 PRIM2P49643 509 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 AGFG1P52594 562 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 SLC5A3P53794 718 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 RPL11P62913 178 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 RAC1P63000 192 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 MRPS9P82933 396 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 TNFAIP2Q03169 654 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 SRSF11Q05519 484 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 SPIRE1Q08AE8 756 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 TBX2Q13207 712 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 UGT8Q16880 541 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 ANO6Q4KMQ2 910 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 PARP10Q53GL7 1025 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 HABP4Q5JVS0 413 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 SLC10A5Q5PT55 438 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 RTP2Q5QGT7 225 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 ESRP1Q6NXG1 681 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 TLDC1Q6P9B6 456 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 SEZ6L2Q6UXD5 910 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 KIF6Q6ZMV9 814 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 USP50Q70EL3 339 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 ZNF34Q8IZ26 560 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 FAM9BQ8IZU0 186 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 TMEM130Q8N3G9 435 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 PDILTQ8N807 584 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 EZH1Q92800 747 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 RPGRQ92834 1020 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 TRIM63Q969Q1 353 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 RBM17Q96I25 401 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 HHIPL1Q96JK4 782 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 CAPNS2Q96L46 248 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 SNX27Q96L92 541 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 PTCHD1Q96NR3 888 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 SLC2A13Q96QE2 648 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 B3GNT5Q9BYG0 378 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 GPR62Q9BZJ7 368 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 QRSL1Q9H0R6 528 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 PRDM5Q9NQX1 630 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 GMPR2Q9P2T1 348 aaKnown RBP3.78□□□□□ -1.8
CNOT1-221ENST00000569924 KDM3BQ7LBC6 1761 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 UBN2Q6ZU65 1347 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CDHR2Q9BYE9 1310 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CUL9Q8IWT3 2517 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 C7orf72A4D263 438 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CAPN8A6NHC0 703 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 LRRC10BA6NIK2 292 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 WTIPA6NIX2 430 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 MAN2B1O00754 1011 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 KCNK3O14649 394 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 DYNC1LI2O43237 492 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 OIP5O43482 229 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 EPB41L2O43491 1005 aaKnown RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 MGEA5O60502 916 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CLASP2O75122 1294 aaKnown RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 RNASEH2AO75792 299 aaKnown RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 BBOX1O75936 387 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 NTSR2O95665 410 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 TBC1D8O95759 1140 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CBX7O95931 251 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 AGR2O95994 175 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 ALDH2P05091 517 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 HTR1BP28222 390 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 PPM1AP35813 382 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 PIK3CBP42338 1070 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 PREPP48147 710 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 RGS19P49795 217 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 SLC16A1P53985 500 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 MANFP55145 182 aaKnown RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 EIF4A1P60842 406 aaKnown RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 DCTN1Q14203 1278 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 SNX17Q15036 470 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 EPHA7Q15375 998 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CNN3Q15417 329 aaKnown RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 HSF5Q4G112 596 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CT83Q5H943 113 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 SUSD4Q5VX71 490 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CST9Q5W186 159 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 FSTL4Q6MZW2 842 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 CDPF1Q6NVV7 123 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 EP400NLQ6ZTU2 488 aa3.77□□□□□ -1.81
CNOT1-221ENST00000569924 C22orf34Q6ZV56 151 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms