RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TSHZ1Q6ZSZ6 1077 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 FAM228AQ86W67 206 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 NELFCDQ8IXH7 590 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 GOLGA5Q8TBA6 731 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 NELFBQ8WX92 580 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 P2RX5Q93086 422 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 BPIFA3Q9BQP9 254 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 MRPL4Q9BYD3 311 aaKnown RBP11.44□□□□□ -0.58
CDH3-210ENST00000569117 NAT10Q9H0A0 1025 aaKnown RBP11.44□□□□□ -0.58
CDH3-210ENST00000569117 GBP3Q9H0R5 595 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 WNT8AQ9H1J5 351 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 AGPAT5Q9NUQ2 364 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 CGNQ9P2M7 1197 aaKnown RBP11.44□□□□□ -0.58
CDH3-210ENST00000569117 RWDD2AQ9UIY3 292 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 CTNND2Q9UQB3 1225 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 TRAF3IP3Q9Y228 551 aa11.44□□□□□ -0.58
CDH3-210ENST00000569117 BICDL2A1A5D9 508 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 CCDC85CA6NKD9 419 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 SMAPO00193 183 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 B4GALT5O43286 388 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 TGFB1I1O43294 461 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 CSDE1O75534 798 aaKnown RBP11.43□□□□□ -0.58
CDH3-210ENST00000569117 RPS6KA5O75582 802 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 GHRP10912 638 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 HOXB3P14651 431 aaPredicted RBP11.43□□□□□ -0.58
CDH3-210ENST00000569117 ARF4P18085 180 aaPredicted RBP11.43□□□□□ -0.58
CDH3-210ENST00000569117 PROZP22891 400 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 LIG4P49917 911 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 PRPF4BQ13523 1007 aaKnown RBP11.43□□□□□ -0.58
CDH3-210ENST00000569117 NFIL3Q16649 462 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 EDRF1Q3B7T1 1238 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 KLHL10Q6JEL2 608 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 TTI2Q6NXR4 508 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 SLC39A4Q6P5W5 647 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 HS2ST1Q7LGA3 356 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 CATSPER4Q7RTX7 472 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 C12orf56Q8IXR9 622 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 SYCP3Q8IZU3 236 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 TMEM174Q8WUU8 243 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 BICD1Q96G01 975 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 ACO2Q99798 780 aaKnown RBP11.43□□□□□ -0.58
CDH3-210ENST00000569117 HTATIP2Q9BUP3 242 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 IKZF4Q9H2S9 585 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 SEMA6BQ9H3T3 888 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 TSPY26PQ9H489 355 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 ALG2Q9H553 416 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 AGPAT3Q9NRZ7 376 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 TMEM39AQ9NV64 488 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 NOC2LQ9Y3T9 749 aaKnown RBP11.43□□□□□ -0.58
CDH3-210ENST00000569117 STYXL1Q9Y6J8 313 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
CDH3-210ENST00000569117 TRIM49BA6NDI0 452 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 TISP43B9A030 160 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 ABLIM1O14639 778 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 GPR182O15218 404 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 CALUO43852 315 aaPredicted RBP11.42□□□□□ -0.58
CDH3-210ENST00000569117 TOM1L1O75674 476 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 FGFR4P22455 802 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 AXLP30530 894 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 CYP2C18P33260 490 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 ZNF165P49910 485 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 PMS1P54277 932 aaKnown RBP11.42□□□□□ -0.58
CDH3-210ENST00000569117 PAK2Q13177 524 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 ATF7IP2Q5U623 682 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 NOTUMQ6P988 496 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 MPZL3Q6UWV2 235 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 FAM43BQ6ZT52 329 aaPredicted RBP11.42□□□□□ -0.58
CDH3-210ENST00000569117 SLC9A9Q8IVB4 645 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 ZC3H3Q8IXZ2 948 aaKnown RBP11.42□□□□□ -0.58
CDH3-210ENST00000569117 FAM200AQ8TCP9 573 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 CCDC51Q96ER9 411 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 MED15Q96RN5 788 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 TSG101Q99816 390 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 TARS2Q9BW92 718 aaKnown RBP11.42□□□□□ -0.58
CDH3-210ENST00000569117 OSBPL7Q9BZF2 842 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 PDZD7Q9H5P4 517 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 AGO3Q9H9G7 860 aaKnown RBP11.42□□□□□ -0.58
CDH3-210ENST00000569117 PTPRHQ9HD43 1115 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 ERVK-5Q9HDB9 667 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 PIN4Q9Y237 131 aaKnown RBP11.42□□□□□ -0.58
CDH3-210ENST00000569117 TNFSF13BQ9Y275 285 aa11.42□□□□□ -0.58
CDH3-210ENST00000569117 TET1Q8NFU7 2136 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 ANK1P16157 1881 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 A0A1B0GUA9 196 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 CARNS1A5YM72 827 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 TRIM43BA6NCK2 446 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 ANKRD63C9JTQ0 380 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 IKBKBO14920 756 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 N4BP3O15049 544 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 NBNO60934 754 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 TIMP1P01033 207 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 CXCL10P02778 98 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 NR3C1P04150 777 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 GARTP22102 1010 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 HOXA11P31270 313 aaPredicted RBP11.41□□□□□ -0.58
CDH3-210ENST00000569117 CD52P31358 61 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 RFC2P35250 354 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 MYL5Q02045 173 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 GUCA2AQ02747 115 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 NCBP1Q09161 790 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms