RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 SPATA31A6Q5VVP1 1343 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 GZMAP12544 262 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 VAMP7P51809 220 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 CACNB3P54284 484 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 EPC2Q52LR7 807 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 VSTM1Q6UX27 236 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 INTS8Q75QN2 995 aaKnown RBP23.12■■□□□ 1.29
DENND4A-208ENST00000568515 SLC5A5Q92911 643 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 PCIF1Q9H4Z3 704 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 L3MBTL1Q9Y468 752 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 MYH11P35749 1972 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 DDTLA6NHG4 134 aaPredicted RBP23.11■■□□□ 1.29
DENND4A-208ENST00000568515 MYO1EQ12965 1108 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 ZNF564Q8TBZ8 553 aaPredicted RBP23.11■■□□□ 1.29
DENND4A-208ENST00000568515 RSRC1Q96IZ7 334 aaKnown RBP23.11■■□□□ 1.29
DENND4A-208ENST00000568515 NUP85Q9BW27 656 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 WHRNQ9P202 907 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 TP73O15350 636 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 ALADP13716 330 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 GCLMP48507 274 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 RWDD2BP57060 319 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 RRP1BQ14684 758 aaKnown RBP23.11■■□□□ 1.29
DENND4A-208ENST00000568515 NOP9Q86U38 636 aaKnown RBP23.11■■□□□ 1.29
DENND4A-208ENST00000568515 GBP7Q8N8V2 638 aaPredicted RBP23.11■■□□□ 1.29
DENND4A-208ENST00000568515 EPS8L1Q8TE68 723 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 AGAP11Q8TF27 550 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 NSMCE1Q8WV22 266 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 KAT5Q92993 513 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 ZC3H12CQ9C0D7 883 aaKnown RBP23.11■■□□□ 1.29
DENND4A-208ENST00000568515 PI4KBQ9UBF8 816 aa23.11■■□□□ 1.29
DENND4A-208ENST00000568515 NOCTQ9UK39 431 aaKnown RBP23.11■■□□□ 1.29
DENND4A-208ENST00000568515 P4HA2O15460 535 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 ANP32DO95626 131 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 MUTP22033 750 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 ALDH5A1P51649 535 aaPredicted RBP23.1■■□□□ 1.29
DENND4A-208ENST00000568515 BNIP1Q12981 228 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 NUGGCQ68CJ6 796 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 TMEM179Q6ZVK1 233 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 SP8Q8IXZ3 490 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 LTBP1Q14766 1721 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 GAS7O60861 476 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 HIP1RO75146 1068 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 BMP3P12645 472 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 ATP5DP30049 168 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 COPS2P61201 443 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 DOK7Q18PE1 504 aa23.1■■□□□ 1.29
DENND4A-208ENST00000568515 L3MBTL3Q96JM7 780 aaPredicted RBP23.1■■□□□ 1.29
DENND4A-208ENST00000568515 SMCHD1A6NHR9 2005 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 IGF2BP3O00425 579 aaKnown RBP eCLIP23.09■■□□□ 1.29
DENND4A-208ENST00000568515 CYP1A2P05177 515 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 PSEN1P49768 467 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 FAM182BQ5T319 152 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 CKAP2Q8WWK9 683 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 SLCO2A1Q92959 643 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 KCNK9Q9NPC2 374 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 ARL2BPQ9Y2Y0 163 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 PPEF1O14829 653 aaPredicted RBP23.09■■□□□ 1.29
DENND4A-208ENST00000568515 DLATP10515 647 aaKnown RBP23.09■■□□□ 1.29
DENND4A-208ENST00000568515 CRKP46108 304 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 MAP2K1Q02750 393 aaPredicted RBP23.09■■□□□ 1.29
DENND4A-208ENST00000568515 KRT17Q04695 432 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 TATDN1Q6P1N9 297 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 FAM71AQ8IYT1 594 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 DAW1Q8N136 415 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 ANKRD42Q8N9B4 389 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 C15orf41Q9Y2V0 281 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 SIPA1L1O43166 1804 aa23.09■■□□□ 1.29
DENND4A-208ENST00000568515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.08■■□□□ 1.29
DENND4A-208ENST00000568515 TISP43B9A030 160 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 GDF11O95390 407 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 CHKAP35790 457 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 MKRN4PQ13434 485 aaPredicted RBP23.08■■□□□ 1.29
DENND4A-208ENST00000568515 C1orf220Q5T0J3 134 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 RHBDF2Q6PJF5 856 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 SPATA21Q7Z572 469 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 C1orf54Q8WWF1 131 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 KLHL29Q96CT2 875 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 MLXIPLQ9NP71 852 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 ARHGEF35A5YM69 484 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 K7ENM7 598 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 CLDN3O15551 220 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 GJB6O95452 261 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 GYS1P13807 737 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 ITIH2P19823 946 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 SLC8A3P57103 927 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 LLGL1Q15334 1064 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 THOC1Q96FV9 657 aaKnown RBP23.08■■□□□ 1.29
DENND4A-208ENST00000568515 ACP6Q9NPH0 428 aa23.08■■□□□ 1.29
DENND4A-208ENST00000568515 O00370 1275 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 FSCN2O14926 492 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 CYP26A1O43174 497 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 CFBP00751 764 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 NAA25Q14CX7 972 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 PSPC1Q8WXF1 523 aaKnown RBP23.07■■□□□ 1.28
DENND4A-208ENST00000568515 ZNF653Q96CK0 615 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 PLCD4Q9BRC7 762 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 UNC45AQ9H3U1 944 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 CTNNAL1Q9UBT7 734 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 ASIC3Q9UHC3 531 aa23.07■■□□□ 1.28
DENND4A-208ENST00000568515 PRR12Q9ULL5 1215 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms