RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 VTNP04004 478 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 PRKCBP05771 671 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 MMP3P08254 477 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 FAM228BP0C875 321 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 VAV2P52735 878 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 EFNA5P52803 228 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 OSTNP61366 133 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 IRX5P78411 483 aaPredicted RBP7.66□□□□□ -1.18
SMG1-215ENST00000568239 BIRC3Q13489 604 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 TFDP1Q14186 410 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 ZBTB41Q5SVQ8 909 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 IRF2BP2Q7Z5L9 587 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 SMC1BQ8NDV3 1235 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 C16orf70Q9BSU1 422 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 TMEM134Q9H6X4 195 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 PDE11AQ9HCR9 933 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 RBAKQ9NYW8 714 aaPredicted RBP7.66□□□□□ -1.18
SMG1-215ENST00000568239 PPME1Q9Y570 386 aa7.66□□□□□ -1.18
SMG1-215ENST00000568239 CTAGE9A4FU28 777 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 TMEM88BA6NKF7 163 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 FAM155AB1AL88 458 aaPredicted RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 F8VZ95 297 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 MAPK13O15264 365 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 EVI5O60447 810 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 C22orf31O95567 290 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 BRD2P25440 801 aaKnown RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 TMOD1P28289 359 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 RGS2P41220 211 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 VASPP50552 380 aaPredicted RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 PPFIA1Q13136 1202 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 ZNF484Q5JVG2 852 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 SV2AQ7L0J3 742 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 ZNF571Q7Z3V5 609 aaPredicted RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 TLK2Q86UE8 772 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 VPS36Q86VN1 386 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 DNAAF5Q86Y56 855 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 TAS1R2Q8TE23 839 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 TMEM174Q8WUU8 243 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 FBXL18Q96ME1 805 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 PI4K2AQ9BTU6 479 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 STK33Q9BYT3 514 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 HAPLN2Q9GZV7 340 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 ZCCHC17Q9NP64 241 aaKnown RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 IGKV6-21A0A0C4DH24 114 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 LDHAP00338 332 aaKnown RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 SOX5P35711 763 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 SLC18A3Q16572 532 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 OLFML2BQ68BL8 750 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 ARHGEF19Q8IW93 802 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 THNSL1Q8IYQ7 743 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 FBXL13Q8NEE6 735 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 LMO3Q8TAP4 145 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 NLRP7Q8WX94 980 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 SECISBP2LQ93073 1101 aaKnown RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 EMID1Q96A84 441 aaPredicted RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 MFSD14AQ96MC6 490 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 ADGRA2Q96PE1 1338 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 C2orf40Q9H1Z8 148 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 KIAA1586Q9HCI6 787 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 TMEM8AQ9HCN3 771 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 LUC7LQ9NQ29 371 aaKnown RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 SETD4Q9NVD3 440 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 FBXL5Q9UKA1 691 aa7.65□□□□□ -1.18
SMG1-215ENST00000568239 BZW2Q9Y6E2 419 aaKnown RBP7.65□□□□□ -1.18
SMG1-215ENST00000568239 A0A087WZ62 844 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 TMCO5BA8MYB1 307 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 FOXN3O00409 490 aaPredicted RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 P4HA2O15460 535 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 MAGEB2O15479 319 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 B4GALT5O43286 388 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 BUB1O43683 1085 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 MSCO60682 206 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 SLU7O95391 586 aaKnown RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 FERP16591 822 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 JAM2P57087 298 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 BEX3Q00994 111 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 TMEM62Q0P6H9 643 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 PRPF4BQ13523 1007 aaKnown RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 NAA30Q147X3 362 aaPredicted RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 GRIK4Q16099 956 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 KIAA0753Q2KHM9 967 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 ASTE1Q2TB18 679 aaPredicted RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 EPC2Q52LR7 807 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 MSL3Q8N5Y2 521 aaKnown RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 MNS1Q8NEH6 495 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 TMC2Q8TDI7 906 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 SEMA4DQ92854 862 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 KAT5Q92993 513 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 NAPGQ99747 312 aaPredicted RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 FDXACB1Q9BRP7 624 aaPredicted RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 TSGA10Q9BZW7 698 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 ARHGAP39Q9C0H5 1083 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 FAM49AQ9H0Q0 323 aaPredicted RBP7.65□□□□□ -1.19
SMG1-215ENST00000568239 RAB20Q9NX57 234 aa7.65□□□□□ -1.19
SMG1-215ENST00000568239 A0A0B4J269 797 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 KIF3CO14782 793 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 PHACTR2O75167 634 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 TOM1L1O75674 476 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 TBC1D8O95759 1140 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 SCP2P22307 547 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms