RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 Q4G0T1 1027 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 CT47A1Q5JQC4 288 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-218ENST00000568153 KRT79Q5XKE5 535 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 DLK2Q6UY11 383 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 SLFN12Q8IYM2 578 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 ANKRD13AQ8IZ07 590 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 CPXCR1Q8N123 301 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 IGSF22Q8N9C0 903 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 MLKLQ8NB16 471 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 KCT2Q8NC54 265 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 TBC1D5Q92609 795 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 ERCC4Q92889 916 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-218ENST00000568153 CALML4Q96GE6 196 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 C12orf42Q96LP6 360 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 FAM20AQ96MK3 541 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 MBOAT7Q96N66 472 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 PPP1R9BQ96SB3 815 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 ANO3Q9BYT9 981 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 CUEDC2Q9H467 287 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 SLC38A10Q9HBR0 1119 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 RAVER2Q9HCJ3 691 aaKnown RBP6.88□□□□□ -1.31
CAPN3-218ENST00000568153 FZD1Q9UP38 647 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 RABGAP1Q9Y3P9 1069 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 FOCADQ5VW36 1801 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ADAMTSL1Q8N6G6 1762 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 A0A087X0B3 334 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 BIN1O00499 593 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 VWA5AO00534 786 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 CXCL11O14625 94 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 FOXN1O15353 648 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 SLC26A4O43511 780 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 SLC37A4O43826 429 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 COBLO75128 1261 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 MYL1P05976 194 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ALAS1P13196 640 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 SPINK2P20155 84 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 SREBF1P36956 1147 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 STAT6P42226 847 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 HSD17B4P51659 736 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 OAZ1P54368 228 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 TPM4P67936 248 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 VGLL4Q14135 290 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 KARSQ15046 597 aaKnown RBP6.87□□□□□ -1.31
CAPN3-218ENST00000568153 IQCB1Q15051 598 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 TKFCQ3LXA3 575 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 PRR16Q569H4 304 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 NT5DC1Q5TFE4 455 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ISM2Q6H9L7 571 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 LUZP1Q86V48 1076 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ERO1BQ86YB8 467 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 HID1Q8IV36 788 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 SLITRK4Q8IW52 837 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 TRIML1Q8N9V2 468 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 SPATA20Q8TB22 786 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 CRYGNQ8WXF5 182 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 CLEC4DQ8WXI8 215 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 HAS1Q92839 578 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 NKD1Q969G9 470 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ACSF2Q96CM8 615 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-218ENST00000568153 CDCA5Q96FF9 252 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 CDK5RAP3Q96JB5 506 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 GSDMAQ96QA5 445 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 BPIFA3Q9BQP9 254 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 LRRC27Q9C0I9 530 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 MAF1Q9H063 256 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 TTC12Q9H892 705 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-218ENST00000568153 TJP2Q9UDY2 1190 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ADAM30Q9UKF2 790 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 MAN1B1Q9UKM7 699 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ADAMTS5Q9UNA0 930 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 CDK5RAP2Q96SN8 1893 aa6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ZNF646O15015 1829 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-218ENST00000568153 ZNF536O15090 1300 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 FAM170BA6NMN3 283 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 PP2D1A8MPX8 630 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 ATP2A1O14983 1001 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 HTR3BO95264 441 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 ADCY5O95622 1261 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 PLCG1P19174 1290 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 STAT3P40763 770 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 MORC3Q14149 939 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 CPSF6Q16630 551 aaKnown RBP eCLIP6.86□□□□□ -1.31
CAPN3-218ENST00000568153 ARMCX6Q7L4S7 300 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 FASTKD5Q7L8L6 764 aaKnown RBP6.86□□□□□ -1.31
CAPN3-218ENST00000568153 GRAMD1CQ8IYS0 662 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 CCDC47Q96A33 483 aaKnown RBP6.86□□□□□ -1.31
CAPN3-218ENST00000568153 ATG4CQ96DT6 458 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 TRIM44Q96DX7 344 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-218ENST00000568153 PLIN2Q99541 437 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 P2RX7Q99572 595 aaKnown RBP6.86□□□□□ -1.31
CAPN3-218ENST00000568153 GTPBP4Q9BZE4 634 aaKnown RBP6.86□□□□□ -1.31
CAPN3-218ENST00000568153 CCSER2Q9H7U1 834 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 MAGEF1Q9HAY2 307 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 KCNMB3Q9NPA1 279 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 PCMTD2Q9NV79 361 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 RMND1Q9NWS8 449 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 REV1Q9UBZ9 1251 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 PCDHB14Q9Y5E9 798 aa6.86□□□□□ -1.31
CAPN3-218ENST00000568153 PSME4Q14997 1843 aa6.85□□□□□ -1.31
CAPN3-218ENST00000568153 ECM29Q5VYK3 1845 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms