RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ASIC1P78348 528 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 CYP4A11Q02928 519 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 FSTL1Q12841 308 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 LRMPQ12912 555 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 STK4Q13043 487 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ITGB3BPQ13352 177 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 BAATQ14032 418 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 KCNB1Q14721 858 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 COG2Q14746 738 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 PGM5Q15124 567 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 CEP55Q53EZ4 464 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ARSHQ5FYA8 562 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 CDKAL1Q5VV42 579 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 KRT79Q5XKE5 535 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 MCTP2Q6DN12 878 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 NSMFQ6X4W1 530 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 GADL1Q6ZQY3 521 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 RNF207Q6ZRF8 634 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 OTOP1Q7RTM1 612 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 CCDC186Q7Z3E2 898 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 PRRT2Q7Z6L0 340 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 CATSPER3Q86XQ3 398 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 SLFN12Q8IYM2 578 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ADSSL1Q8N142 457 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 C17orf53Q8N3J3 647 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 GIMAP8Q8ND71 665 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ENOX1Q8TC92 643 aaKnown RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 NELFBQ8WX92 580 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 DNAJC19Q96DA6 116 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 MXRA8Q9BRK3 442 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 TMPRSS13Q9BYE2 586 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 WDR11Q9BZH6 1224 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 RNF208Q9H0X6 261 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 CUEDC2Q9H467 287 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 MAGEF1Q9HAY2 307 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 PXMP2Q9NR77 195 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 RGL1Q9NZL6 768 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 TMOD4Q9NZQ9 345 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 PYCARDQ9ULZ3 195 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 TLR6Q9Y2C9 796 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ZKSCAN5Q9Y2L8 839 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 UBIAD1Q9Y5Z9 338 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 KAT6AQ92794 2004 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 TRIP12Q14669 1992 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 KDM3AQ9Y4C1 1321 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 MSTNO14793 375 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 DHX15O43143 795 aaKnown RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 CHMP2AO43633 222 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 ATP9AO75110 1047 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 PLA2G4BP0C869 781 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 MYCLP12524 364 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 CYP11B2P19099 503 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 ERCC5P28715 1186 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 PTPN11Q06124 597 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 PPATQ06203 517 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 GOLGA8FQ08AF8 430 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 GOLGA8DPQ0D2H9 430 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 TRAF1Q13077 416 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 PAK1Q13153 545 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 PPP2R5CQ13362 524 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 CTTNQ14247 550 aaKnown RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 LRRC41Q15345 812 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 TKFCQ3LXA3 575 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 HS1BP3Q53T59 392 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 EXOSC6Q5RKV6 272 aaKnown RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 LRCH2Q5VUJ6 765 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 SPATA1Q5VX52 437 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 FDX2Q6P4F2 183 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 UNC13DQ70J99 1090 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 SV2BQ7L1I2 683 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 TMC6Q7Z403 805 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 ZSCAN30Q86W11 494 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 IRF2BP1Q8IU81 584 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 ANKRD13AQ8IZ07 590 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 FAM43AQ8N2R8 423 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 C12orf50Q8NA57 414 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 GPBAR1Q8TDU6 330 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 CACTINQ8WUQ7 758 aaKnown RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 OPTNQ96CV9 577 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 DYDC2Q96IM9 177 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 CDK5RAP3Q96JB5 506 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 FAM20AQ96MK3 541 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 EIF2AK1Q9BQI3 630 aaKnown RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 PDCD2LQ9BRP1 358 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 RAB34Q9BZG1 259 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 AGO4Q9HCK5 861 aaKnown RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 POLD4Q9HCU8 107 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 SLC39A2Q9NP94 309 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 A1CFQ9NQ94 594 aaKnown RBP6.37□□□□□ -1.39
SF3B3-210ENST00000567654 RAD18Q9NS91 495 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 PCDHB5Q9Y5E4 795 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 CSADQ9Y600 493 aa6.37□□□□□ -1.39
SF3B3-210ENST00000567654 ZNF236Q9UL36 1845 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 MYPNQ86TC9 1320 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 RSPH10B2B2RC85 870 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 ATP2A1O14983 1001 aa6.36□□□□□ -1.39
SF3B3-210ENST00000567654 TEX33O43247 280 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms