RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 SMC1AQ14683 1233 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 PUS10Q3MIT2 529 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 RILPL1Q5EBL4 403 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 AGMOQ6ZNB7 445 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 ZNF280BQ86YH2 543 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 HACE1Q8IYU2 909 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 VPS52Q8N1B4 723 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 C4orf32Q8N8J7 132 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 BCL7CQ8WUZ0 217 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 IFT74Q96LB3 600 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 RPS6KC1Q96S38 1066 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 GAD1Q99259 594 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 CSRNP2Q9H175 543 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 NRDE2Q9H7Z3 1164 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 PDCD11Q14690 1871 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 CNTNAP2Q9UHC6 1331 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 C2CD2LO14523 706 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 FSCN2O14926 492 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 MBTPS2O43462 519 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 HARSP12081 509 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 XRCC6P12956 609 aaKnown RBP eCLIP11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 CYP11B2P19099 503 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 NCLP19338 710 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 AXLP30530 894 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 PLCB3Q01970 1234 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 ADAM15Q13444 863 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 SMAD4Q13485 552 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 PRPF4BQ13523 1007 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 BMS1Q14692 1282 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 PPP2R5AQ15172 486 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 IL17AQ16552 155 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 DUSP6Q16828 381 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 FAM178BQ8IXR5 827 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 GJD3Q8N144 294 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 SMG8Q8ND04 991 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 VN1R2Q8NFZ6 395 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 RABGGTAQ92696 567 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 CCDC51Q96ER9 411 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 CD320Q9NPF0 282 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
GTF3C1-206ENST00000566779 ARL5CA6NH57 179 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 LAD1O00515 517 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 ZNF623O75123 536 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 HIP1RO75146 1068 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 DDHD2O94830 711 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 GALTP07902 379 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 MYBP10242 640 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 ATP2C1P98194 919 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 DHX8Q14562 1220 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 MAPK6Q16659 721 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 CTC1Q2NKJ3 1217 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 IGSF22Q8N9C0 903 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 CNNM3Q8NE01 707 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 IGSF21Q96ID5 467 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 TRAIPQ9BWF2 469 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 C2orf40Q9H1Z8 148 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 CLEC1BQ9P126 229 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 CACNG4Q9UBN1 327 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 DNM3Q9UQ16 869 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 FAN1Q9Y2M0 1017 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 GDAQ9Y2T3 454 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 USP15Q9Y4E8 981 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 VCANP13611 3396 aa11.16□□□□□ -0.62
GTF3C1-206ENST00000566779 VWA8A3KMH1 1905 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 MTCL1Q9Y4B5 1905 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 N4BP3O15049 544 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 EYA4O95677 639 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 CXCL14O95715 111 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 WEE2P0C1S8 567 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 PRPHP41219 470 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 NAMPTP43490 491 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 PEX3P56589 373 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 CEBPZQ03701 1054 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 ZP2Q05996 745 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 DMP1Q13316 513 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 COL19A1Q14993 1142 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 CDCA2Q69YH5 1023 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 PDE12Q6L8Q7 609 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 KCNK18Q7Z418 384 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 MRPL10Q7Z7H8 261 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 HASPINQ8TF76 798 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 KIFAP3Q92845 792 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 CDCA3Q99618 268 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 ADPGKQ9BRR6 497 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 BACH2Q9BYV9 841 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 PDZD7Q9H5P4 517 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 NGRNQ9NPE2 291 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 KANSL3Q9P2N6 904 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 CDH22Q9UJ99 828 aa11.15□□□□□ -0.62
GTF3C1-206ENST00000566779 ANK1P16157 1881 aa11.15□□□□□ -0.63
GTF3C1-206ENST00000566779 MYO10Q9HD67 2058 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 C2orf71A6NGG8 1288 aa11.14□□□□□ -0.63
GTF3C1-206ENST00000566779 CASTOR2A6NHX0 329 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms