RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	CLDN3	O15551	220 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	EXTL3	O43909	919 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	EXOC3	O60645	756 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	PARN	O95453	639 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	LDHA	P00338	332 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	CLTB	P09497	229 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	MCF2	P10911	925 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	EPB41	P11171	864 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	FGFR4	P22455	802 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	PSMC2	P35998	433 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	CASP4	P49662	377 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	POU5F1	Q01860	360 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	NCBP1	Q09161	790 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	KCNJ12	Q14500	433 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	DCAF4L1	Q3SXM0	396 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	ZNF568	Q3ZCX4	644 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	SLC27A1	Q6PCB7	646 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	FRMD5	Q7Z6J6	570 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	TRIM59	Q8IWR1	403 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	GPD1L	Q8N335	351 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	ZBTB45	Q96K62	511 aa	Predicted RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	MSTO1	Q9BUK6	570 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	TRAIP	Q9BWF2	469 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	AGO3	Q9H9G7	860 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	METTL14	Q9HCE5	456 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	KIAA1586	Q9HCI6	787 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	CHST12	Q9NRB3	414 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	LIMA1	Q9UHB6	759 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	AGO2	Q9UKV8	859 aa	Known RBP	10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	ST3GAL5	Q9UNP4	418 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	USP20	Q9Y2K6	914 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	FRMD4B	Q9Y2L6	1034 aa		10.74	□□□□□ -0.69
SIN3A-205	ENST00000564778	RALGAPA2	Q2PPJ7	1873 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	KIAA0355	O15063	1070 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	OGT	O15294	1046 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	CXCL10	P02778	98 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	ADRB2	P07550	413 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	GHR	P10912	638 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	PAK2	Q13177	524 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	KRT31	Q15323	416 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	SNRNP35	Q16560	246 aa	Known RBP	10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	KYAT1	Q16773	422 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	CEP135	Q66GS9	1140 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	INTS8	Q75QN2	995 aa	Known RBP	10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	CBWD2	Q8IUF1	395 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	BRSK2	Q8IWQ3	736 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	FAM186B	Q8IYM0	893 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	ZSWIM2	Q8NEG5	633 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	ANKRD20A12P	Q8NF67	263 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	SAAL1	Q96ER3	474 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	EEF2KMT	Q96G04	330 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	CPB2	Q96IY4	423 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	MFSD14A	Q96MC6	490 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	ADPGK	Q9BRR6	497 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	WNT8A	Q9H1J5	351 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	HIPK3	Q9H422	1215 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	PADI3	Q9ULW8	664 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	PIN4	Q9Y237	131 aa	Known RBP	10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778	ATP11B	Q9Y2G3	1177 aa		10.73	□□□□□ -0.69
SIN3A-205	ENST00000564778		A0A1B0GTH6	734 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778		H0YGN5	161 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	NBN	O60934	754 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	PRKCSH	P14314	528 aa	Predicted RBP	10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	CD52	P31358	61 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	FANCC	Q00597	558 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	PPP2R3A	Q06190	1150 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	CYP24A1	Q07973	514 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	DSC3	Q14574	896 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	GPNMB	Q14956	572 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	MAN2A1	Q16706	1144 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	TMEM132A	Q24JP5	1023 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	CCDC40	Q4G0X9	1142 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	HSP90AA4P	Q58FG1	418 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	UBXN11	Q5T124	520 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	TCHP	Q9BT92	498 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	OSBPL7	Q9BZF2	842 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	TMX1	Q9H3N1	280 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	PCIF1	Q9H4Z3	704 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	CPSF3	Q9UKF6	684 aa	Known RBP	10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	UMODL1	Q5DID0	1318 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	ANK1	P16157	1881 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	TET1	Q8NFU7	2136 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	TRIOBP	Q9H2D6	2365 aa		10.72	□□□□□ -0.69
SIN3A-205	ENST00000564778	GOLGA8IP	A6NC78	632 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	ZNF233	A6NK53	670 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	GOLGA8J	A6NMD2	632 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	LGALS16	A8MUM7	142 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	CIT	O14578	2027 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	AP5Z1	O43299	807 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	CLTA	P09496	248 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	CDK11B	P21127	795 aa	Known RBP	10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	RFC2	P35250	354 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	GRM5	P41594	1212 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	MATR3	P43243	847 aa	Known RBP eCLIP	10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	MTIF2	P46199	727 aa	Known RBP	10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	RAB27A	P51159	221 aa		10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms