RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 LARGE1O95461 756 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 RAP1GAPP47736 663 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 OCRLQ01968 901 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ARMCX4Q5H9R4 360 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ENGASEQ8NFI3 743 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 CASKIN2Q8WXE0 1202 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 DLG3Q92796 817 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ARHGEF38Q9NXL2 777 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 PLEKHG1Q9ULL1 1385 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 NOP56O00567 594 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 TRMUO75648 421 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 TOM1L1O75674 476 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 PTPREP23469 700 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 TMEM237Q96Q45 408 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 PHTF1Q9UMS5 762 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ZNF185O15231 689 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 AFPP02771 609 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 EIF4BP23588 611 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 KDSRQ06136 332 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 CAVIN4Q5BKX8 364 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 CCDC137Q6PK04 289 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 CCDC59Q9P031 241 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 CCDC61Q9Y6R9 512 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 A0A087WWV3 80 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 TMEM247A6NEH6 219 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 PFDN6O15212 129 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 TM9SF1O15321 606 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 TBC1D4O60343 1298 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 CCNT1O60563 726 aaKnown RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 TAF1BQ53T94 588 aaPredicted RBP6.62□□□□□ -1.35
CLK3-212ENST00000563418 CYB5RLQ6IPT4 315 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 PM20D2Q8IYS1 436 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 PLK2Q9NYY3 685 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 DCDC2Q9UHG0 476 aa6.62□□□□□ -1.35
CLK3-212ENST00000563418 ABCC1P33527 1531 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 ARHGEF37A1IGU5 675 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 LRRC53A6NM62 1247 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 SLC12A2P55011 1212 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 GIMAP8Q8ND71 665 aaPredicted RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 SLC5A4Q9NY91 659 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 UVRAGQ9P2Y5 699 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 PIK3CDO00329 1044 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 GAS2O43903 313 aaKnown RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 SPAG6O75602 509 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 IFNB1P01574 187 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 TNNC2P02585 160 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 ITGA2BP08514 1039 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 SRGAP2CP0DJJ0 459 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 SRGAP2BP0DMP2 458 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 CYP11B2P19099 503 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 NLRP6P59044 892 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 BTKQ06187 659 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLK3-212ENST00000563418 GRM1Q13255 1194 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 LRRC36Q1X8D7 754 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 ACAP3Q96P50 834 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 ECSITQ9BQ95 431 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 OSBPL6Q9BZF3 934 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 IARS2Q9NSE4 1012 aaKnown RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 TLR7Q9NYK1 1049 aaKnown RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 MPP6Q9NZW5 540 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 SHROOM2Q13796 1616 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 F8W8V4 182 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 AXIN1O15169 862 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 PAEPP09466 180 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 PCP11498 1178 aaKnown RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 BPIFB4P59827 614 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 EPS8Q12929 822 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 CNPY1Q3B7I2 92 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 ZCCHC7Q8N3Z6 543 aaKnown RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 GDPD5Q8WTR4 605 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 GGT7Q9UJ14 662 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 EMILIN1Q9Y6C2 1016 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 NAB2Q15742 525 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 RNF220Q5VTB9 566 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 TMEM53Q6P2H8 277 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 TTC17Q96AE7 1141 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 MXD3Q9BW11 206 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 TELO2Q9Y4R8 837 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 ARHGEF40Q8TER5 1519 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 SAGE2PA6NJ88 616 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 M0QX08 132 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 TOB2Q14106 344 aaPredicted RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 SUZ12Q15022 739 aaKnown RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 CNGA2Q16280 664 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 AAGABQ6PD74 315 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 DCUN1D2Q6PH85 259 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 NELFCDQ8IXH7 590 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 EFHD2Q96C19 240 aaPredicted RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 CARD14Q9BXL6 1004 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 CLEC4MQ9H2X3 399 aaPredicted RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 MANSC1Q9H8J5 431 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 WDR91A4D1P6 747 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 FCGR1AP12314 374 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 WASHC5Q12768 1159 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 SLC18A3Q16572 532 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 DGUOKQ16854 277 aa6.61□□□□□ -1.35
CLK3-212ENST00000563418 RWDD4Q6NW29 188 aaKnown RBP6.61□□□□□ -1.35
CLK3-212ENST00000563418 OR6Y1Q8NGX8 325 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms