RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 SYCE1LA8MT33 242 aa10□□□□□ -0.81
CDH1-205ENST00000562836 XPO1O14980 1071 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 RASGRP1O95267 797 aa10□□□□□ -0.81
CDH1-205ENST00000562836 ATP5BP06576 529 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 GHRP10912 638 aa10□□□□□ -0.81
CDH1-205ENST00000562836 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 NQO1P15559 274 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 PHBP35232 272 aa10□□□□□ -0.81
CDH1-205ENST00000562836 KCNJ6P48051 423 aa10□□□□□ -0.81
CDH1-205ENST00000562836 ENPEPQ07075 957 aa10□□□□□ -0.81
CDH1-205ENST00000562836 SLFN5Q08AF3 891 aa10□□□□□ -0.81
CDH1-205ENST00000562836 AIMP1Q12904 312 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 AKAP4Q5JQC9 854 aa10□□□□□ -0.81
CDH1-205ENST00000562836 SPOPLQ6IQ16 392 aa10□□□□□ -0.81
CDH1-205ENST00000562836 TTBK2Q6IQ55 1244 aa10□□□□□ -0.81
CDH1-205ENST00000562836 SLC30A10Q6XR72 485 aa10□□□□□ -0.81
CDH1-205ENST00000562836 GLRX5Q86SX6 157 aa10□□□□□ -0.81
CDH1-205ENST00000562836 DEPDC4Q8N2C3 294 aa10□□□□□ -0.81
CDH1-205ENST00000562836 RIBC1Q8N443 379 aaPredicted RBP10□□□□□ -0.81
CDH1-205ENST00000562836 LILRB4Q8NHJ6 448 aa10□□□□□ -0.81
CDH1-205ENST00000562836 CAGE1Q8TC20 777 aa10□□□□□ -0.81
CDH1-205ENST00000562836 SPATA18Q8TC71 538 aa10□□□□□ -0.81
CDH1-205ENST00000562836 GAB3Q8WWW8 586 aa10□□□□□ -0.81
CDH1-205ENST00000562836 NOX5Q96PH1 765 aa10□□□□□ -0.81
CDH1-205ENST00000562836 GAS2L1Q99501 681 aaPredicted RBP10□□□□□ -0.81
CDH1-205ENST00000562836 RIOK1Q9BRS2 568 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 MRPL1Q9BYD6 325 aaKnown RBP10□□□□□ -0.81
CDH1-205ENST00000562836 CYP26B1Q9NR63 512 aa10□□□□□ -0.81
CDH1-205ENST00000562836 ASNSD1Q9NWL6 643 aa10□□□□□ -0.81
CDH1-205ENST00000562836 AIPL1Q9NZN9 384 aa10□□□□□ -0.81
CDH1-205ENST00000562836 SYNJ2O15056 1496 aa10□□□□□ -0.81
CDH1-205ENST00000562836 CCDC141Q6ZP82 1450 aa10□□□□□ -0.81
CDH1-205ENST00000562836 MTSS1O43312 755 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 GNAI2P04899 355 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ACADSP16219 412 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 EPB42P16452 691 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 DNAJB2P25686 324 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 TRIM23P36406 574 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 TXKP42681 527 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ALDH5A1P51649 535 aaPredicted RBP9.99□□□□□ -0.81
CDH1-205ENST00000562836 DAB2P98082 770 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ATP8B2P98198 1209 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 OTUD4Q01804 1114 aaKnown RBP9.99□□□□□ -0.81
CDH1-205ENST00000562836 PLD1Q13393 1074 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 PDE1CQ14123 709 aaPredicted RBP9.99□□□□□ -0.81
CDH1-205ENST00000562836 BTBD8Q5XKL5 378 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 SLFN13Q68D06 897 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 BORAQ6PGQ7 559 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 CRTC1Q6UUV9 634 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 SEPT1Q8WYJ6 367 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 FAM136AQ96C01 138 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 RAD21L1Q9H4I0 556 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 SP140LQ9H930 580 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 KBTBD4Q9NVX7 518 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 TEKT2Q9UIF3 430 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ANAPC5Q9UJX4 755 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 OR6C65A6NJZ3 312 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 PI4K2BG5E9Z4 385 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ZBTB43O43298 467 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 IDH3BO43837 385 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 DNAJB5O75953 348 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 HSMCR30P0CW71 290 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ACTN1P12814 892 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 FGFR4P22455 802 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 TARSP26639 723 aaKnown RBP9.99□□□□□ -0.81
CDH1-205ENST00000562836 SLCO1A2P46721 670 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 CLCN4P51793 760 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 RPP38P78345 283 aaKnown RBP9.99□□□□□ -0.81
CDH1-205ENST00000562836 PHKG1Q16816 387 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 TXNRD1Q16881 649 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 GRAMD1BQ3KR37 738 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 XKR5Q6UX68 686 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ITIH5Q86UX2 942 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 SH2D3CQ8N5H7 860 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 PI4K2BQ8TCG2 481 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 WACQ9BTA9 647 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 CCDC28BQ9BUN5 200 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 VPS11Q9H270 941 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 PHAXQ9H814 394 aaKnown RBP9.99□□□□□ -0.81
CDH1-205ENST00000562836 MARCH7Q9H992 704 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 MRM3Q9HC36 420 aaKnown RBP9.99□□□□□ -0.81
CDH1-205ENST00000562836 KCNMB3Q9NPA1 279 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 PPANQ9NQ55 473 aaKnown RBP9.99□□□□□ -0.81
CDH1-205ENST00000562836 NDUFA13Q9P0J0 144 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ADAM22Q9P0K1 906 aa9.99□□□□□ -0.81
CDH1-205ENST00000562836 ANO9A1A5B4 782 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 CAPN14A8MX76 684 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 TRDMT1O14717 391 aaKnown RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 RAD51BO15315 384 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 SNX4O95219 450 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 GSTM1P09488 218 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 PPP2R1AP30153 589 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 VBP1P61758 197 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 KCNJ2P63252 427 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 GRIK5Q16478 980 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 ZNF423Q2M1K9 1284 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 LIN52Q52LA3 116 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 NME9Q86XW9 330 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 NPAS4Q8IUM7 802 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms