RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 SCNN1GP51170 649 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 TDGQ13569 410 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 ASTLQ6HA08 431 aaPredicted RBP16.16■□□□□ 0.18
SPG7-205ENST00000561945 SLC27A1Q6PCB7 646 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 CPB2Q96IY4 423 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 PRIMPOLQ96LW4 560 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 ZFP42Q96MM3 310 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 WDR6Q9NNW5 1121 aaKnown RBP16.16■□□□□ 0.18
SPG7-205ENST00000561945 MAN1C1Q9NR34 630 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 FNIP2Q9P278 1114 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 IGSF9Q9P2J2 1179 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 DAXXQ9UER7 740 aaPredicted RBP16.16■□□□□ 0.18
SPG7-205ENST00000561945 DUSP12Q9UNI6 340 aa16.16■□□□□ 0.18
SPG7-205ENST00000561945 N4BP1O75113 896 aaKnown RBP16.15■□□□□ 0.18
SPG7-205ENST00000561945 SSBP05455 408 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPG7-205ENST00000561945 NPR3P17342 541 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 NBL1P41271 181 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 OR1G1P47890 313 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 FAM187BQ17R55 369 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 RIF1Q5UIP0 2472 aaKnown RBP16.15■□□□□ 0.18
SPG7-205ENST00000561945 CDCA2Q69YH5 1023 aaPredicted RBP16.15■□□□□ 0.18
SPG7-205ENST00000561945 CWF19L1Q69YN2 538 aaKnown RBP16.15■□□□□ 0.18
SPG7-205ENST00000561945 LILRA6Q6PI73 481 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 DIS3L2Q8IYB7 885 aaKnown RBP16.15■□□□□ 0.18
SPG7-205ENST00000561945 HACE1Q8IYU2 909 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 NECAB1Q8N987 351 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 COLEC11Q9BWP8 271 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 FZD8Q9H461 694 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 NXF3Q9H4D5 531 aaKnown RBP16.15■□□□□ 0.18
SPG7-205ENST00000561945 KCNK12Q9HB15 430 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPG7-205ENST00000561945 FAM86C1Q9NVL1 165 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 EPS15L1Q9UBC2 864 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 PRG3Q9Y2Y8 225 aaPredicted RBP16.15■□□□□ 0.18
SPG7-205ENST00000561945 DOCK8Q8NF50 2099 aa16.15■□□□□ 0.18
SPG7-205ENST00000561945 F8W810 466 aa16.14■□□□□ 0.17
SPG7-205ENST00000561945 B4GALT5O43286 388 aa16.14■□□□□ 0.17
SPG7-205ENST00000561945 NR1I2O75469 434 aa16.14■□□□□ 0.17
SPG7-205ENST00000561945 GLUD1P00367 558 aa16.14■□□□□ 0.17
SPG7-205ENST00000561945 GRIK3Q13003 919 aa16.14■□□□□ 0.17
SPG7-205ENST00000561945 ELMSAN1Q6PJG2 1045 aa16.14■□□□□ 0.17
SPG7-205ENST00000561945 ATOH1Q92858 354 aaPredicted RBP16.14■□□□□ 0.17
SPG7-205ENST00000561945 ZNF707Q96C28 371 aaPredicted RBP16.14■□□□□ 0.17
SPG7-205ENST00000561945 PLEKHA4Q9H4M7 779 aa16.14■□□□□ 0.17
SPG7-205ENST00000561945 TUFT1Q9NNX1 390 aa16.14■□□□□ 0.17
SPG7-205ENST00000561945 CCDC195A0A1B0GUA6 201 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 H0Y858 1186 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 C2CD2LO14523 706 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 GFRA3O60609 400 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 AOC1P19801 751 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 TXKP42681 527 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 CREMQ03060 361 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 ST3GAL1Q11201 340 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 ORC2Q13416 577 aaPredicted RBP16.13■□□□□ 0.17
SPG7-205ENST00000561945 FUT10Q6P4F1 479 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 CATSPER3Q86XQ3 398 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 MCPH1Q8NEM0 835 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 PIGOQ8TEQ8 1089 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 POLR3CQ9BUI4 534 aaPredicted RBP16.13■□□□□ 0.17
SPG7-205ENST00000561945 GPR62Q9BZJ7 368 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 TRIM6Q9C030 488 aaPredicted RBP16.13■□□□□ 0.17
SPG7-205ENST00000561945 POLR3FQ9H1D9 316 aaPredicted RBP16.13■□□□□ 0.17
SPG7-205ENST00000561945 ZDHHC7Q9NXF8 308 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 ADAM28Q9UKQ2 775 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 CLUHO75153 1309 aa16.13■□□□□ 0.17
SPG7-205ENST00000561945 PTPRZ1P23471 2315 aaPredicted RBP16.12■□□□□ 0.17
SPG7-205ENST00000561945 POTEMA6NI47 508 aa16.12■□□□□ 0.17
SPG7-205ENST00000561945 AKAP5P24588 427 aa16.12■□□□□ 0.17
SPG7-205ENST00000561945 NAB2Q15742 525 aa16.12■□□□□ 0.17
SPG7-205ENST00000561945 USP41Q3LFD5 358 aa16.12■□□□□ 0.17
SPG7-205ENST00000561945 STAMQ92783 540 aa16.12■□□□□ 0.17
SPG7-205ENST00000561945 NXPE3Q969Y0 559 aa16.12■□□□□ 0.17
SPG7-205ENST00000561945 TMEM60Q9H2L4 133 aa16.12■□□□□ 0.17
SPG7-205ENST00000561945 PRMT7Q9NVM4 692 aaPredicted RBP16.12■□□□□ 0.17
SPG7-205ENST00000561945 WNT16Q9UBV4 365 aa16.12■□□□□ 0.17
SPG7-205ENST00000561945 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 TGM5O43548 720 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 JAK2O60674 1132 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 MED24O75448 989 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 NPTXRO95502 500 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 MUTP22033 750 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 RPA1P27694 616 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 NACC1Q96RE7 527 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 CCDC113Q9H0I3 377 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 NT5C3AQ9H0P0 336 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 GPRC5CQ9NQ84 441 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 VWA8A3KMH1 1905 aa16.11■□□□□ 0.17
SPG7-205ENST00000561945 ANHXE9PGG2 379 aa16.1■□□□□ 0.17
SPG7-205ENST00000561945 PTGESO14684 152 aa16.1■□□□□ 0.17
SPG7-205ENST00000561945 USO1O60763 962 aaKnown RBP16.1■□□□□ 0.17
SPG7-205ENST00000561945 RFPL2O75678 378 aa16.1■□□□□ 0.17
SPG7-205ENST00000561945 TUSC3Q13454 348 aa16.1■□□□□ 0.17
SPG7-205ENST00000561945 TRIM29Q14134 588 aa16.1■□□□□ 0.17
SPG7-205ENST00000561945 HSP90AA2PQ14568 343 aaPredicted RBP16.1■□□□□ 0.17
SPG7-205ENST00000561945 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
SPG7-205ENST00000561945 CDR2LQ86X02 465 aaPredicted RBP16.1■□□□□ 0.17
SPG7-205ENST00000561945 CCDC105Q8IYK2 499 aa16.1■□□□□ 0.17
SPG7-205ENST00000561945 CCDC43Q96MW1 224 aaKnown RBP16.1■□□□□ 0.17
SPG7-205ENST00000561945 RTP3Q9BQQ7 232 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms