RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ZNF521Q96K83 1311 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 PLXNB2O15031 1838 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 TEX51A0A1B0GUA7 166 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 BLACEA4D250 179 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 OTOL1A6NHN0 477 aaPredicted RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 KRTAP10-2P60368 255 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 NFKB2Q00653 900 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 TEKQ02763 1124 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 TCP10Q12799 353 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 LRRC41Q15345 812 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 PRSS53Q2L4Q9 553 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 HERC4Q5GLZ8 1057 aaPredicted RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 FAM209AQ5JX71 171 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 PRAMEF19Q5SWL8 479 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 PSRC1Q6PGN9 363 aaPredicted RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 NSMFQ6X4W1 530 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 JAZF1Q86VZ6 243 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 LILRA2Q8N149 483 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 PDZD8Q8NEN9 1154 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 GPRC5AQ8NFJ5 357 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 TDRD7Q8NHU6 1098 aaKnown RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 USP6NLQ92738 828 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 ZNF669Q96BR6 464 aaPredicted RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 INTS4Q96HW7 963 aaKnown RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 AARSD1Q9BTE6 412 aaKnown RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 ISCA1Q9BUE6 129 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 SGPP1Q9BX95 441 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 MTIF3Q9H2K0 278 aaKnown RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 PANK3Q9H999 370 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.98□□□□□ -1.77
SPG11-225ENST00000561391 CYP26B1Q9NR63 512 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 ARHGEF4Q9NR80 690 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 TMOD2Q9NZR1 351 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 AGTPBP1Q9UPW5 1226 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 BACE2Q9Y5Z0 518 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 FASNP49327 2511 aaKnown RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 RIF1Q5UIP0 2472 aaKnown RBP3.98□□□□□ -1.77
SPG11-225ENST00000561391 TRANK1O15050 2925 aa3.98□□□□□ -1.77
SPG11-225ENST00000561391 FAM186AA6NE01 2351 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 TRBV23-1A0A0A0MS06 115 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 ESYT3A0FGR9 886 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 TLDC2A0PJX2 215 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 TMEM82A0PJX8 343 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 AURKAO14965 403 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 PDE8AO60658 829 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 LPXNO60711 386 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 TAF5LO75529 589 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 ZNF205O95201 554 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 PABPC1P11940 636 aaKnown RBP3.97□□□□□ -1.77
SPG11-225ENST00000561391 PI3P19957 117 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 HOXC12P31275 282 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 PRKAR2BP31323 418 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 CYP2C18P33260 490 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 FKBP1AP62942 108 aaKnown RBP3.97□□□□□ -1.77
SPG11-225ENST00000561391 TAP1Q03518 808 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 C2orf27AQ580R0 203 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 RTP2Q5QGT7 225 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 MFSD14BQ5SR56 506 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 WDR78Q5VTH9 848 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 FOXB2Q5VYV0 432 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 GPR142Q7Z601 462 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 PLEKHH3Q7Z736 793 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 FAM83AQ86UY5 434 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 ADHFE1Q8IWW8 467 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 SCYL3Q8IZE3 742 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 ZDHHC14Q8IZN3 488 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 TMEM145Q8NBT3 493 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 FEZF2Q8TBJ5 459 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 THAP3Q8WTV1 239 aaPredicted RBP3.97□□□□□ -1.77
SPG11-225ENST00000561391 CDC5LQ99459 802 aaKnown RBP3.97□□□□□ -1.77
SPG11-225ENST00000561391 ANKRD2Q9GZV1 360 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 XYLT2Q9H1B5 865 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 PORCNQ9H237 461 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 TXNRD2Q9NNW7 524 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 IL23AQ9NPF7 189 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 DLL3Q9NYJ7 618 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 CLEC1BQ9P126 229 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 GPR160Q9UJ42 338 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 TMA7Q9Y2S6 64 aaKnown RBP3.97□□□□□ -1.77
SPG11-225ENST00000561391 IRAK3Q9Y616 596 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 NCOR2Q9Y618 2525 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 TECTAO75443 2155 aa3.97□□□□□ -1.77
SPG11-225ENST00000561391 UTYO14607 1347 aa3.96□□□□□ -1.77
SPG11-225ENST00000561391 TRIOO75962 3097 aa3.96□□□□□ -1.77
SPG11-225ENST00000561391 GPR179Q6PRD1 2367 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 ACACBO00763 2458 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 MAP1BP46821 2468 aaKnown RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 ANKRD11Q6UB99 2663 aaPredicted RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 NPHP3-ACAD11A0A0J9YXS1 232 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 A0A1W2PQ45 241 aaPredicted RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 A0A1W2PQY0 241 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 FITM1A5D6W6 292 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 DLX3O60479 287 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 THBDP07204 575 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 PLS3P13797 630 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 HSP90B1P14625 803 aaKnown RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 IL1R1P14778 569 aa3.96□□□□□ -1.78
SPG11-225ENST00000561391 ATP2A2P16615 1042 aaKnown RBP3.96□□□□□ -1.78
SPG11-225ENST00000561391 MAPK4P31152 587 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms