RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ALDH7A1P49419 539 aaKnown RBP13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 COASYQ13057 564 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 PRPF4BQ13523 1007 aaKnown RBP13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 SMC1AQ14683 1233 aaKnown RBP13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 PCBP1Q15365 356 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 NAB2Q15742 525 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 MAPK6Q16659 721 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 ARL6IP4Q66PJ3 421 aaKnown RBP13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 BRAPQ7Z569 592 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 DDX53Q86TM3 631 aaKnown RBP13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 KIFAP3Q92845 792 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 TMEM169Q96HH4 297 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 RAB34Q9BZG1 259 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 S1PR5Q9H228 398 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 ARHGAP28Q9P2N2 729 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 FBXO2Q9UK22 296 aaPredicted RBP13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 DNM3Q9UQ16 869 aa13.97□□□□□ -0.17
CHRNA3-208ENST00000561128 C5orf42Q9H799 3197 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 PHLPP2Q6ZVD8 1323 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 DENND4AQ7Z401 1863 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 SLC16A4O15374 487 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 WEE2P0C1S8 567 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 PLA2G4BP0C869 781 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 CTSAP10619 480 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 GUCY2CP25092 1073 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 MARCKSP29966 332 aaPredicted RBP13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 CA8P35219 290 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 OR1G1P47890 313 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 KRT17Q04695 432 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 ANKRD54Q6NXT1 300 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 GJD3Q8N144 294 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 C12orf76Q8N812 135 aaPredicted RBP13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 SYT2Q8N9I0 419 aaPredicted RBP13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 HASPINQ8TF76 798 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 SUSD6Q92537 303 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 PRIMPOLQ96LW4 560 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 CLIC6Q96NY7 704 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 USP28Q96RU2 1077 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 TMEM175Q9BSA9 504 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 TARS2Q9BW92 718 aaKnown RBP13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 TRIM6Q9C030 488 aaPredicted RBP13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 HAPLN2Q9GZV7 340 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 C2orf40Q9H1Z8 148 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 CDT1Q9H211 546 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 NGRNQ9NPE2 291 aaKnown RBP13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 PARP2Q9UGN5 583 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 GIT1Q9Y2X7 761 aa13.96□□□□□ -0.17
CHRNA3-208ENST00000561128 MYH11P35749 1972 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 A0A087X0B3 334 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 CASTOR2A6NHX0 329 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 CCDC169A6NNP5 214 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 N4BP3O15049 544 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 NCK2O43639 380 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 LILRB3O75022 631 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 CXCL14O95715 111 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 PKP1Q13835 747 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 MCM6Q14566 821 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 PPP2R5AQ15172 486 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 ATF7IP2Q5U623 682 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 FOXD4L5Q5VV16 416 aaPredicted RBP13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 PDE12Q6L8Q7 609 aaKnown RBP13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 ADHFE1Q8IWW8 467 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 CNNM3Q8NE01 707 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 SLC22A17Q8WUG5 538 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 FOXD4L4Q8WXT5 416 aaPredicted RBP13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 INTS4Q96HW7 963 aaKnown RBP13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 EPSTI1Q96J88 318 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 ZBTB45Q96K62 511 aaPredicted RBP13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 REEP2Q9BRK0 252 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 HERC2P3Q9BVR0 1158 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 GPR62Q9BZJ7 368 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 IKZF4Q9H2S9 585 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 PTPRHQ9HD43 1115 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 PUF60Q9UHX1 559 aaKnown RBP13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 FAN1Q9Y2M0 1017 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 VWA8A3KMH1 1905 aa13.95□□□□□ -0.18
CHRNA3-208ENST00000561128 C2CD2LO14523 706 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 KIF4AO95239 1232 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 CNPP09543 421 aaKnown RBP13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 MYBP10242 640 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 SP100P23497 879 aaPredicted RBP13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 GRIK3Q13003 919 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 DHX8Q14562 1220 aaKnown RBP13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 SEZ6Q53EL9 994 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 GPBP1Q86WP2 473 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 TMEM161BQ8NDZ6 487 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 PPP2R3CQ969Q6 453 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 IFT74Q96LB3 600 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 CDCA3Q99618 268 aaPredicted RBP13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 ACO2Q99798 780 aaKnown RBP13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 GOLGA2P5Q9HBQ8 144 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 TRIP11Q15643 1979 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 C2orf16Q68DN1 1984 aa13.94□□□□□ -0.18
CHRNA3-208ENST00000561128 PDCD11Q14690 1871 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms