RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 NBPF20Q3BBV1 942 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 ZC2HC1CQ53FD0 456 aaPredicted RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 C16orf86Q6ZW13 317 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 MFN1Q8IWA4 741 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 ADGRF4Q8IZF3 695 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 ASAP3Q8TDY4 903 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 ANKRD27Q96NW4 1050 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 AGPAT1Q99943 283 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 DNAJC18Q9H819 358 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 TP73O15350 636 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 SLC16A3O15427 465 aaKnown RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 CLDN3O15551 220 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 TTC4O95801 387 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 SP100P23497 879 aaPredicted RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 POLD1P28340 1107 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 SMARCA1P28370 1054 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 NMT1P30419 496 aaKnown RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 ROR2Q01974 943 aaKnown RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 TMED2Q15363 201 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 ATG4AQ8WYN0 398 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 GPR101Q96P66 508 aaPredicted RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 BHMT2Q9H2M3 363 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 DENND2DQ9H6A0 471 aaPredicted RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 A0A1W2PRG0 241 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 hCG_1984214I3L0E3 225 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 TGFB1I1O43294 461 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 TBCAO75347 108 aaKnown RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 ARMC3Q5W041 872 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 ZNF713Q8N859 430 aaPredicted RBP17.65■□□□□ 0.42
TPM1-228ENST00000560975 IRAK4Q9NWZ3 460 aa17.65■□□□□ 0.42
TPM1-228ENST00000560975 RAD21O60216 631 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 PSMC2P35998 433 aaKnown RBP17.64■□□□□ 0.41
TPM1-228ENST00000560975 WDR4P57081 412 aaKnown RBP17.64■□□□□ 0.41
TPM1-228ENST00000560975 CCDC15Q0P6D6 951 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 ZNF568Q3ZCX4 644 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 NSMFQ6X4W1 530 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 KIAA0825Q8IV33 1275 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 C9orf72Q96LT7 481 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 MXD3Q9BW11 206 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 PHTF1Q9UMS5 762 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 PNMA6FA0A0J9YX94 578 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 A0A1B0GVG6 124 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 GTPBP10A4D1E9 387 aaKnown RBP17.64■□□□□ 0.41
TPM1-228ENST00000560975 TOM1O60784 492 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 NPTXRO95502 500 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 BTDP43251 543 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 CLK2P49760 499 aaKnown RBP17.64■□□□□ 0.41
TPM1-228ENST00000560975 ITGA8P53708 1063 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 IL9RQ01113 521 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 TRAF1Q13077 416 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 ITPK1Q13572 414 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 SIX1Q15475 284 aaPredicted RBP17.64■□□□□ 0.41
TPM1-228ENST00000560975 PRR16Q569H4 304 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 BRINP3Q76B58 766 aa17.64■□□□□ 0.41
TPM1-228ENST00000560975 SLC7A6OSQ96CW6 309 aaPredicted RBP17.64■□□□□ 0.41
TPM1-228ENST00000560975 RASA4BC9J798 803 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 USP17L10C9JJH3 530 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 MAPK13O15264 365 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 RASA4O43374 803 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 T-ENOLP0DO92 83 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 ACVR2BQ13705 512 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 CCDC6Q16204 474 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 PHLDB3Q6NSJ2 640 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 C11orf63Q6NUN7 778 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.63■□□□□ 0.41
TPM1-228ENST00000560975 RPUSD2Q8IZ73 545 aaKnown RBP17.63■□□□□ 0.41
TPM1-228ENST00000560975 PHC3Q8NDX5 983 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 BORCS6Q96GS4 357 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 ADAM33Q9BZ11 813 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 NINJ2Q9NZG7 142 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 APEX2Q9UBZ4 518 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 RTN3O95197 1032 aaPredicted RBP17.63■□□□□ 0.41
TPM1-228ENST00000560975 ALDH3A1P30838 453 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 GPC5P78333 572 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 SGO2Q562F6 1265 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 RFWD3Q6PCD5 774 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 APBB1IPQ7Z5R6 666 aaPredicted RBP17.63■□□□□ 0.41
TPM1-228ENST00000560975 SYT2Q8N9I0 419 aaPredicted RBP17.63■□□□□ 0.41
TPM1-228ENST00000560975 GRAMD1AQ96CP6 724 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 BTG4Q9NY30 223 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 USH1CQ9Y6N9 552 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 PHLPP1O60346 1717 aa17.63■□□□□ 0.41
TPM1-228ENST00000560975 LGR5O75473 907 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 GGPS1O95749 300 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 GALNT15Q8N3T1 639 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 TRIM4Q9C037 500 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 UBE2TQ9NPD8 197 aaPredicted RBP17.62■□□□□ 0.41
TPM1-228ENST00000560975 ACP6Q9NPH0 428 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 METTL5Q9NRN9 209 aaKnown RBP17.62■□□□□ 0.41
TPM1-228ENST00000560975 CHST7Q9NS84 486 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 NMRK1Q9NWW6 199 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 E7ENQ6 273 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 ATP5HO75947 161 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 NT5C2P49902 561 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 RCN2Q14257 317 aa17.62■□□□□ 0.41
TPM1-228ENST00000560975 CYP1B1Q16678 543 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms