RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 CUL4BQ13620 913 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 CAVIN1Q6NZI2 390 aaKnown RBP18.23■□□□□ 0.51
SNX22-204ENST00000560607 DTWD2Q8NBA8 298 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 TCP11Q8WWU5 503 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 DDX12PQ92771 950 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 CEP89Q96ST8 783 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 TIPINQ9BVW5 301 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 TRIM9Q9C026 710 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 ZHX3Q9H4I2 956 aa18.23■□□□□ 0.51
SNX22-204ENST00000560607 DHX33Q9H6R0 707 aaKnown RBP18.23■□□□□ 0.51
SNX22-204ENST00000560607 RC3H2Q9HBD1 1191 aaKnown RBP18.23■□□□□ 0.51
SNX22-204ENST00000560607 PI15O43692 258 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 GAS2O43903 313 aaKnown RBP18.22■□□□□ 0.51
SNX22-204ENST00000560607 HIP1RO75146 1068 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 FAM13AO94988 1023 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 SMC2O95347 1197 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 CTSHP09668 335 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 AOC1P19801 751 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 SDHBP21912 280 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 GUCY2CP25092 1073 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 TMOD1P28289 359 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 ARSHQ5FYA8 562 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 CCDC183Q5T5S1 534 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 CWF19L1Q69YN2 538 aaKnown RBP18.22■□□□□ 0.51
SNX22-204ENST00000560607 EFCAB12Q6NXP0 572 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 LRRC71Q8N4P6 559 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 DCLK2Q8N568 766 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 KLHL23Q8NBE8 558 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 MICAL1Q8TDZ2 1067 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 CCDC47Q96A33 483 aaKnown RBP18.22■□□□□ 0.51
SNX22-204ENST00000560607 ZBTB10Q96DT7 871 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 DRC1Q96MC2 740 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 C7orf25Q9BPX7 421 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 S1PR5Q9H228 398 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 R4GN57 208 aa18.22■□□□□ 0.51
SNX22-204ENST00000560607 FRYLO94915 3013 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 FSD2A1L4K1 749 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 TREHO43280 583 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 GIT2Q14161 759 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 MARCH8Q5T0T0 291 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 CCDC65Q8IXS2 484 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 ELOA2Q8IYF1 753 aaPredicted RBP18.21■□□□□ 0.51
SNX22-204ENST00000560607 VN1R2Q8NFZ6 395 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 KIFAP3Q92845 792 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 TMEM143Q96AN5 459 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 ZNF689Q96CS4 500 aaPredicted RBP18.21■□□□□ 0.51
SNX22-204ENST00000560607 MAP7D2Q96T17 732 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 POLR3FQ9H1D9 316 aaPredicted RBP18.21■□□□□ 0.51
SNX22-204ENST00000560607 POLD4Q9HCU8 107 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 XPNPEP1Q9NQW7 623 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 ODF2LQ9ULJ1 636 aa18.21■□□□□ 0.51
SNX22-204ENST00000560607 MBLAC1A4D2B0 266 aaPredicted RBP18.2■□□□□ 0.5
SNX22-204ENST00000560607 HOXC8P31273 242 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 CLCN3P51790 818 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 DPYDQ12882 1025 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 IER5Q5VY09 327 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 ERCC4Q92889 916 aaPredicted RBP18.2■□□□□ 0.5
SNX22-204ENST00000560607 SMARCE1Q969G3 411 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 DNAJC19Q96DA6 116 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 RTP3Q9BQQ7 232 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 APOL5Q9BWW9 433 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 FAM49AQ9H0Q0 323 aaPredicted RBP18.2■□□□□ 0.5
SNX22-204ENST00000560607 GPRC5CQ9NQ84 441 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 PANK4Q9NVE7 773 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 TMEM63CQ9P1W3 806 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 AKT3Q9Y243 479 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 PCDHA2Q9Y5H9 948 aa18.2■□□□□ 0.5
SNX22-204ENST00000560607 MRPL42Q9Y6G3 142 aaKnown RBP18.2■□□□□ 0.5
SNX22-204ENST00000560607 MYO10Q9HD67 2058 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 IGKV6-21A0A0C4DH24 114 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 SMIM35A0A1B0GVV1 85 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 CAND2O75155 1236 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 RPN1P04843 607 aaKnown RBP18.19■□□□□ 0.5
SNX22-204ENST00000560607 SRGAP2BP0DMP2 458 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 ATXN1P54253 815 aaKnown RBP18.19■□□□□ 0.5
SNX22-204ENST00000560607 ADAM17P78536 824 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 TAF2Q6P1X5 1199 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 UNC13DQ70J99 1090 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 MYCT1Q8N699 235 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 PSPC1Q8WXF1 523 aaKnown RBP18.19■□□□□ 0.5
SNX22-204ENST00000560607 IFT74Q96LB3 600 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 CDCA3Q99618 268 aaPredicted RBP18.19■□□□□ 0.5
SNX22-204ENST00000560607 EXOC1Q9NV70 894 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 SUCLA2Q9P2R7 463 aaPredicted RBP18.19■□□□□ 0.5
SNX22-204ENST00000560607 USP24Q9UPU5 2620 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 COL4A3BPQ9Y5P4 624 aa18.19■□□□□ 0.5
SNX22-204ENST00000560607 SFI1A8K8P3 1242 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 C2CD4DB7Z1M9 353 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 DGKIO75912 1065 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 ASGR2P07307 311 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 GAP43P17677 238 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 ANKRD54Q6NXT1 300 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 CNNM4Q6P4Q7 775 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 RUFY4Q6ZNE9 571 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 RSPH3Q86UC2 560 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 RHPN2Q8IUC4 686 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 DNAJB3Q8WWF6 145 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 SCLT1Q96NL6 688 aa18.18■□□□□ 0.5
SNX22-204ENST00000560607 PARVGQ9HBI0 331 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms