RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PRKCBP05771 671 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 TNNI1P19237 187 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 FGFR4P22455 802 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 USP8P40818 1118 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 SLC26A2P50443 739 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 CDK17Q00537 523 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM132AQ24JP5 1023 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 IQSEC1Q6DN90 963 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 TLK2Q86UE8 772 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 CCDC102AQ96A19 550 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 AIPL1Q9NZN9 384 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 SALL4Q9UJQ4 1053 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 MKI67P46013 3256 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 KAT6AQ92794 2004 aa11.8□□□□□ -0.52
SNRPA1-211ENST00000560433 TMCO5BA8MYB1 307 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 KIF2AO00139 706 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 FOXN3O00409 490 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 CLDN3O15551 220 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 EVI5O60447 810 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 CALCAP01258 141 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 MYCNP04198 464 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 GARTP22102 1010 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 PSMC4P43686 418 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 JAM2P57087 298 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 KRT83P78385 493 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 HTRA3P83110 453 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 TRIM32Q13049 653 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 MXD4Q14582 209 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 DGKDQ16760 1214 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 EPC2Q52LR7 807 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 MARCH8Q5T0T0 291 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 SV2AQ7L0J3 742 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 PPM1KQ8N3J5 372 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 TCP11Q8WWU5 503 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 MFSD14AQ96MC6 490 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 FBXL18Q96ME1 805 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 EDEM3Q9BZQ6 932 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 FAM49AQ9H0Q0 323 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 F8VZ95 297 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 H0YCG3 227 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 BUB1O43683 1085 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 EXTL3O43909 919 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 MAGEA1P43355 309 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 INHBEP58166 350 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF200P98182 395 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 PPFIA1Q13136 1202 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 HIC1Q14526 733 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 GRIK4Q16099 956 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 MAPK6Q16659 721 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 USP6NLQ92738 828 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 TATDN2Q93075 761 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 EMID1Q96A84 441 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 CPB2Q96IY4 423 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 CCDC113Q9H0I3 377 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 IFT122Q9HBG6 1241 aa11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 RBAKQ9NYW8 714 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-211ENST00000560433 PHLPP2Q6ZVD8 1323 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 A0A0B4J269 797 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 RGS2P41220 211 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 SNRPFP62306 86 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 KIAA0753Q2KHM9 967 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 EEF1DP3Q658K8 133 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 KRT39Q6A163 491 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 SPOPLQ6IQ16 392 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 MTHFD1LQ6UB35 978 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 ZBTB8OSQ8IWT0 167 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM192Q8IY95 271 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM174Q8WUU8 243 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 DHX38Q92620 1227 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 SCLT1Q96NL6 688 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 FNBP1Q96RU3 617 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 ACO2Q99798 780 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM134Q9H6X4 195 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 HDAC6Q9UBN7 1215 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 MYADML2A6NDP7 307 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 CA12O43570 354 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 MOCS3O95396 460 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 TM4SF4P48230 202 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 VAV2P52735 878 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 CETN1Q12798 172 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 KIZQ2M2Z5 673 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 OR5B17Q8NGF7 314 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 STK33Q9BYT3 514 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 SEPT11Q9NVA2 429 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 STYXL1Q9Y6J8 313 aa11.78□□□□□ -0.52
SNRPA1-211ENST00000560433 MYH10P35580 1976 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 SSU72P8A0A1W2PR75 194 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 KRT86O43790 486 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 MYL3P08590 195 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 SOX5P35711 763 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 STAT1P42224 750 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 MBTD1Q05BQ5 628 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 KIF5AQ12840 1032 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms