RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 DNM3Q9UQ16 869 aa16.26■□□□□ 0.19
IDH3A-219ENST00000560414 CNTNAP2Q9UHC6 1331 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 VPS37CA5D8V6 355 aaPredicted RBP16.25■□□□□ 0.19
IDH3A-219ENST00000560414 VWA3AA6NCI4 1184 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 NPTXRO95502 500 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 GLP2RO95838 553 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 SLC11A1P49279 550 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 PUS10Q3MIT2 529 aaKnown RBP16.25■□□□□ 0.19
IDH3A-219ENST00000560414 PDE12Q6L8Q7 609 aaKnown RBP16.25■□□□□ 0.19
IDH3A-219ENST00000560414 ZBTB8OSQ8IWT0 167 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 FAM178BQ8IXR5 827 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 CNNM3Q8NE01 707 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 VN1R2Q8NFZ6 395 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 RSPH1Q8WYR4 309 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 TMEM169Q96HH4 297 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 GAD1Q99259 594 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 PLIN2Q99541 437 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 KIFC3Q9BVG8 833 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
IDH3A-219ENST00000560414 FZD8Q9H461 694 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 NXF3Q9H4D5 531 aaKnown RBP16.25■□□□□ 0.19
IDH3A-219ENST00000560414 BARX2Q9UMQ3 279 aaPredicted RBP16.25■□□□□ 0.19
IDH3A-219ENST00000560414 ADGRG1Q9Y653 693 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 BDP1A6H8Y1 2624 aa16.25■□□□□ 0.19
IDH3A-219ENST00000560414 A0A1B0GUA9 196 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 EYA4O95677 639 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 AKAP5P24588 427 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 MLH1P40692 756 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 NAMPTP43490 491 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 DUSP6Q16828 381 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 PROX2Q3B8N5 592 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 SLC27A1Q6PCB7 646 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 DEPTORQ8TB45 409 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 IGSF21Q96ID5 467 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 MSLNLQ96KJ4 702 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 ZFP42Q96MM3 310 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 PNMA5Q96PV4 448 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 RUSC1Q9BVN2 902 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 NGRNQ9NPE2 291 aaKnown RBP16.24■□□□□ 0.19
IDH3A-219ENST00000560414 PRMT7Q9NVM4 692 aaPredicted RBP16.24■□□□□ 0.19
IDH3A-219ENST00000560414 MIOSQ9NXC5 875 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 CD207Q9UJ71 328 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
IDH3A-219ENST00000560414 ARL5CA6NH57 179 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 MBTPS2O43462 519 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 EDN1P05305 212 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 PRKCBP05771 671 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 CA8P35219 290 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 SCNN1GP51170 649 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 MAPK6Q16659 721 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 FAM187BQ17R55 369 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 PACS2Q86VP3 889 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 VPS52Q8N1B4 723 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 AUTS2Q8WXX7 1259 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 KIFAP3Q92845 792 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 IFT74Q96LB3 600 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 PRIMPOLQ96LW4 560 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 FAM193BQ96PV7 902 aaPredicted RBP16.23■□□□□ 0.19
IDH3A-219ENST00000560414 CCDC113Q9H0I3 377 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 C2orf40Q9H1Z8 148 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 UBN1Q9NPG3 1134 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 KANSL3Q9P2N6 904 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
IDH3A-219ENST00000560414 C2orf71A6NGG8 1288 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 CXCL14O95715 111 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 ALDH2P05091 517 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 PRPF4BQ13523 1007 aaKnown RBP16.22■□□□□ 0.19
IDH3A-219ENST00000560414 SMC1AQ14683 1233 aaKnown RBP16.22■□□□□ 0.19
IDH3A-219ENST00000560414 PPP2R5AQ15172 486 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 TMEM132AQ24JP5 1023 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 ARL6IP4Q66PJ3 421 aaKnown RBP16.22■□□□□ 0.19
IDH3A-219ENST00000560414 RINT1Q6NUQ1 792 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 LLGL2Q6P1M3 1020 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 BRAPQ7Z569 592 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 DDX53Q86TM3 631 aaKnown RBP16.22■□□□□ 0.19
IDH3A-219ENST00000560414 DAW1Q8N136 415 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 MRPL43Q8N983 215 aaKnown RBP16.22■□□□□ 0.19
IDH3A-219ENST00000560414 CDCA3Q99618 268 aaPredicted RBP16.22■□□□□ 0.19
IDH3A-219ENST00000560414 VN1R3Q9BXE9 311 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 PDZD7Q9H5P4 517 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 KLK14Q9P0G3 267 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 PARP2Q9UGN5 583 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 FAM50BQ9Y247 325 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 FAN1Q9Y2M0 1017 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 GIT1Q9Y2X7 761 aa16.22■□□□□ 0.19
IDH3A-219ENST00000560414 SFI1A8K8P3 1242 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 ACKR2O00590 384 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 NRP1O14786 923 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 HIP1RO75146 1068 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 SSBP05455 408 aaKnown RBP eCLIP16.21■□□□□ 0.19
IDH3A-219ENST00000560414 SYT1P21579 422 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 SSTR3P32745 418 aaPredicted RBP16.21■□□□□ 0.19
IDH3A-219ENST00000560414 PEX3P56589 373 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 GRIN1Q05586 938 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 SMAD4Q13485 552 aaKnown RBP16.21■□□□□ 0.19
IDH3A-219ENST00000560414 KCNC3Q14003 757 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 SF3A1Q15459 793 aaKnown RBP16.21■□□□□ 0.19
IDH3A-219ENST00000560414 SMAD2Q15796 467 aaKnown RBP16.21■□□□□ 0.19
IDH3A-219ENST00000560414 HYIQ5T013 277 aa16.21■□□□□ 0.19
IDH3A-219ENST00000560414 DMRTA1Q5VZB9 504 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms