RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 SMAP1Q8IYB5 467 aaPredicted RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 LRRC71Q8N4P6 559 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 TNPO1Q92973 898 aaKnown RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 BRF1Q92994 677 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 PHKBQ93100 1093 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 ZNF668Q96K58 619 aaPredicted RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 UPF3BQ9BZI7 483 aaKnown RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 GLT8D2Q9H1C3 349 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 ELAC1Q9H777 363 aaKnown RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 TLE6Q9H808 572 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 TLR9Q9NR96 1032 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 TBC1D22BQ9NU19 505 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 GABBR1Q9UBS5 961 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 LRFN2Q9ULH4 789 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 PCDHA10Q9Y5I2 948 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 SNX14Q9Y5W7 946 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 DENND3A2RUS2 1198 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 TMEM150BA6NC51 233 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 TMEM221A6NGB7 291 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 M0R296 226 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 GPR182O15218 404 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 CDC45O75419 566 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 CSDE1O75534 798 aaKnown RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 PSAPP07602 524 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 FGFR4P22455 802 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 EIF4BP23588 611 aaKnown RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 GPC3P51654 580 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 TCF15Q12870 199 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 EFCAB12Q6NXP0 572 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 ANKRD54Q6NXT1 300 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 KCNT2Q6UVM3 1135 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 FAM43BQ6ZT52 329 aaPredicted RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 TMEM173Q86WV6 379 aaPredicted RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 ECHDC2Q86YB7 292 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 REXO1Q8N1G1 1221 aaKnown RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 METTL13Q8N6R0 699 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 MRPS27Q92552 414 aaKnown RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 SLC5A5Q92911 643 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 ASIC4Q96FT7 647 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 JAKMIP1Q96N16 626 aaKnown RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 POP1Q99575 1024 aaKnown RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 PHF7Q9BWX1 381 aaPredicted RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 TMEM117Q9H0C3 514 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 KCNH6Q9H252 994 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 NCOA5Q9HCD5 579 aaKnown RBP6.55□□□□□ -1.36
USP3-215ENST00000559771 C6orf50Q9HD87 102 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 LZTS1Q9Y250 596 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 PCDHB12Q9Y5F1 795 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 PIEZO1Q92508 2521 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 DENND4AQ7Z401 1863 aa6.55□□□□□ -1.36
USP3-215ENST00000559771 PLXNA3P51805 1871 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 IGKV6-21A0A0C4DH24 114 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 A0A0U1RQF3 1178 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 MEIS3P2A8K0S8 358 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 TRIM66O15016 1216 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 MAGEB2O15479 319 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 B4GALT3O60512 393 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 PSMD10O75832 226 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 HMGB1P09429 215 aaKnown RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 DARSP14868 501 aaKnown RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 IFNAR1P17181 557 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 LAG3P18627 525 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 RPS6KB1P23443 525 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 PDIA3P30101 505 aaKnown RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 VCPP55072 806 aaKnown RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 SETQ01105 290 aaPredicted RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 PRKCEQ02156 737 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 TOB2Q14106 344 aaPredicted RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 KRT32Q14532 448 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 QPCTQ16769 361 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 PLPP4Q5VZY2 271 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 CENPQQ7L2Z9 268 aaPredicted RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 TAS1R3Q7RTX0 852 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 ZBTB33Q86T24 672 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 CKAP2LQ8IYA6 745 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 THNSL1Q8IYQ7 743 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 SLC39A11Q8N1S5 342 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 ETNPPLQ8TBG4 499 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 MICAL1Q8TDZ2 1067 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 BCL7CQ8WUZ0 217 aaPredicted RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 TSC1Q92574 1164 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 RPGRIP1Q96KN7 1286 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 MFSD14AQ96MC6 490 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 MBOAT7Q96N66 472 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 AIFM3Q96NN9 605 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 RIT2Q99578 217 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 CDCA3Q99618 268 aaPredicted RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 TCF25Q9BQ70 676 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 SH2D3AQ9BRG2 576 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 APOL5Q9BWW9 433 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 VN1R3Q9BXE9 311 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 RNF26Q9BY78 433 aaPredicted RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 NIFKQ9BYG3 293 aaKnown RBP6.54□□□□□ -1.36
USP3-215ENST00000559771 UNC45AQ9H3U1 944 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 ATP6V0A4Q9HBG4 840 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 VPS54Q9P1Q0 977 aa6.54□□□□□ -1.36
USP3-215ENST00000559771 ARID2Q68CP9 1835 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 CYP3A7-CYP3A51PA0A087WV96 503 aa6.53□□□□□ -1.36
USP3-215ENST00000559771 C2orf71A6NGG8 1288 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms