RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 DDX53Q86TM3 631 aaKnown RBP16.31■□□□□ 0.2
RPL28-208ENST00000559463 HSCBQ8IWL3 235 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 COLGALT2Q8IYK4 626 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 HACE1Q8IYU2 909 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 MSLNLQ96KJ4 702 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 FAM193BQ96PV7 902 aaPredicted RBP16.31■□□□□ 0.2
RPL28-208ENST00000559463 TMEM175Q9BSA9 504 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 TIPINQ9BVW5 301 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 BLOC1S4Q9NUP1 217 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 MARCH5Q9NX47 278 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
RPL28-208ENST00000559463 FBXO2Q9UK22 296 aaPredicted RBP16.31■□□□□ 0.2
RPL28-208ENST00000559463 CARNS1A5YM72 827 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 C2orf71A6NGG8 1288 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 SFI1A8K8P3 1242 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 PLCG1P19174 1290 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
RPL28-208ENST00000559463 NDUFV1P49821 464 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 KCNC3Q14003 757 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
RPL28-208ENST00000559463 TMEM132AQ24JP5 1023 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 PUS10Q3MIT2 529 aaKnown RBP16.3■□□□□ 0.2
RPL28-208ENST00000559463 ARSHQ5FYA8 562 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 USP49Q70CQ1 688 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 TMC7Q7Z402 723 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 CALML4Q96GE6 196 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 CDCA3Q99618 268 aaPredicted RBP16.3■□□□□ 0.2
RPL28-208ENST00000559463 CXCL16Q9H2A7 254 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 TMEM134Q9H6X4 195 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 C17orf75Q9HAS0 396 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 KMT5AQ9NQR1 393 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 KCND2Q9NZV8 630 aa16.3■□□□□ 0.2
RPL28-208ENST00000559463 BARX2Q9UMQ3 279 aaPredicted RBP16.3■□□□□ 0.2
RPL28-208ENST00000559463 F8W810 466 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 K7ERI5 159 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 NRP1O14786 923 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 SLC16A4O15374 487 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
RPL28-208ENST00000559463 CEBPZQ03701 1054 aaKnown RBP16.29■□□□□ 0.2
RPL28-208ENST00000559463 ATF7IP2Q5U623 682 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 MRPL43Q8N983 215 aaKnown RBP16.29■□□□□ 0.2
RPL28-208ENST00000559463 RAD54LQ92698 747 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 EPSTI1Q96J88 318 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 CLIC6Q96NY7 704 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 ADPGKQ9BRR6 497 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 CCSER1Q9C0I3 900 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 ZSCAN16Q9H4T2 348 aaPredicted RBP16.29■□□□□ 0.2
RPL28-208ENST00000559463 PARP2Q9UGN5 583 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 CD207Q9UJ71 328 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 FAN1Q9Y2M0 1017 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
RPL28-208ENST00000559463 MBTPS2O43462 519 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 RECQL4O94761 1208 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 CTSAP10619 480 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 PLS3P13797 630 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 GRIK3Q13003 919 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 COASYQ13057 564 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 SMAD4Q13485 552 aaKnown RBP16.28■□□□□ 0.2
RPL28-208ENST00000559463 MCM6Q14566 821 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 DCAF4L1Q3SXM0 396 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 GPBP1Q86WP2 473 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 FAM178BQ8IXR5 827 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 SMRP1Q8NCR6 262 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 SPIRE2Q8WWL2 714 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
RPL28-208ENST00000559463 REEP2Q9BRK0 252 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 NTPCRQ9BSD7 190 aaKnown RBP16.28■□□□□ 0.2
RPL28-208ENST00000559463 PTPRHQ9HD43 1115 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 CD320Q9NPF0 282 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 CACNG4Q9UBN1 327 aa16.28■□□□□ 0.2
RPL28-208ENST00000559463 PRG3Q9Y2Y8 225 aaPredicted RBP16.28■□□□□ 0.2
RPL28-208ENST00000559463 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
RPL28-208ENST00000559463 MORC2Q9Y6X9 1032 aaPredicted RBP16.28■□□□□ 0.2
RPL28-208ENST00000559463 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.27■□□□□ 0.2
RPL28-208ENST00000559463 FSD2A1L4K1 749 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 ABLIM1O14639 778 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 PTGESO14684 152 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 EFEMP2O95967 443 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 ALDH2P05091 517 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 OR1G1P47890 313 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 DHX8Q14562 1220 aaKnown RBP16.27■□□□□ 0.2
RPL28-208ENST00000559463 PTPN14Q15678 1187 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 SMAD2Q15796 467 aaKnown RBP16.27■□□□□ 0.2
RPL28-208ENST00000559463 TMEM184AQ6ZMB5 413 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 TMEM161BQ8NDZ6 487 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 RASSF8Q8NHQ8 419 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 RPS6KC1Q96S38 1066 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 MRPL4Q9BYD3 311 aaKnown RBP16.27■□□□□ 0.2
RPL28-208ENST00000559463 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 RBM19Q9Y4C8 960 aaKnown RBP16.27■□□□□ 0.2
RPL28-208ENST00000559463 IRAK3Q9Y616 596 aa16.27■□□□□ 0.2
RPL28-208ENST00000559463 CLASP2O75122 1294 aaKnown RBP16.26■□□□□ 0.19
RPL28-208ENST00000559463 CXCL14O95715 111 aa16.26■□□□□ 0.19
RPL28-208ENST00000559463 MAPTP10636 758 aaKnown RBP16.26■□□□□ 0.19
RPL28-208ENST00000559463 PROZP22891 400 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms